Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   BSEL_RS11510 Genome accession   NC_014219
Coordinates   2484550..2486259 (-) Length   569 a.a.
NCBI ID   WP_013173187.1    Uniprot ID   D6XVM7
Organism   [Bacillus] selenitireducens MLS10     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2479550..2491259
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSEL_RS11490 (Bsel_2257) - 2480116..2481027 (-) 912 WP_013173183.1 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase -
  BSEL_RS11495 (Bsel_2258) - 2481164..2483227 (-) 2064 WP_013173184.1 sigma-54-dependent Fis family transcriptional regulator -
  BSEL_RS11500 (Bsel_2259) - 2483374..2483631 (+) 258 WP_013173185.1 DUF2627 domain-containing protein -
  BSEL_RS11505 (Bsel_2260) spo0A 2483651..2484430 (-) 780 WP_013173186.1 sporulation transcription factor Spo0A Regulator
  BSEL_RS11510 (Bsel_2261) recN 2484550..2486259 (-) 1710 WP_013173187.1 DNA repair protein RecN Machinery gene
  BSEL_RS11515 (Bsel_2262) ahrC 2486279..2486728 (-) 450 WP_013173188.1 transcriptional regulator AhrC/ArgR -
  BSEL_RS11520 (Bsel_2263) - 2486850..2487656 (-) 807 WP_013173189.1 TlyA family RNA methyltransferase -
  BSEL_RS11525 (Bsel_2264) dxs 2487657..2489546 (-) 1890 WP_013173190.1 1-deoxy-D-xylulose-5-phosphate synthase -
  BSEL_RS11530 (Bsel_2265) - 2489556..2490170 (-) 615 WP_013173191.1 hypothetical protein -

Sequence

Protein


Download         Length: 569 a.a.        Molecular weight: 64136.55 Da        Isoelectric Point: 4.8118

>NTDB_id=37492 BSEL_RS11510 WP_013173187.1 2484550..2486259(-) (recN) [[Bacillus] selenitireducens MLS10]
MLLELTIKDFAIIERVTISFEGGLTVMTGETGAGKSIIIDAIGQLIGGRGSADFVRHASKRAEIEGIFSIEDPVNRELNA
LFEELDLPKIEEGTVLLRREITNQGKSICRINGKLTTLGILRQVGQTLVDIHGQHEHQRLLQQDQHVGFLDRFAGKPVEK
AKKEYGVLYKQYMQKRKQLHQFSDNEQQLAQRLDLLQYQYNEISDADLSPGEDEELLEEKKLLENSEHLYNAVRGSYDAL
YGDGKGLEWVMTAMNQLSEAAEVDDKLASLNESVTNQYYLLEEASFSLRDYFETITFDSERLQVIEDRLSEIQQLKRKYG
ATVNDILEYASRVEEEIDALSNREQRIEEWQEEVAALRKDLILEGTHLHEQRKKAAGKLEKAIQTQLKELYMKDTVFDVK
IDTGDLESGDEAITKEGIDKVSFQVATNKGEPLKSLAKIASGGEISRMILALKTILSKHEGVTSLIFDEVDTGVSGRVAQ
AIAEKIHRISGNSQVLCITHLPQVAAMADTHMFISKESKQNRTITRVEALSAKDKTEEISRMISGVEITDLTRQHANELI
AQADRMKEE

Nucleotide


Download         Length: 1710 bp        

>NTDB_id=37492 BSEL_RS11510 WP_013173187.1 2484550..2486259(-) (recN) [[Bacillus] selenitireducens MLS10]
TTGTTACTTGAACTGACAATAAAAGATTTTGCAATCATTGAACGCGTCACCATTTCATTTGAAGGCGGTTTGACTGTCAT
GACGGGTGAAACCGGAGCGGGGAAATCCATCATCATTGATGCCATAGGACAATTAATCGGTGGACGCGGGTCTGCCGATT
TTGTTCGGCATGCCAGCAAACGCGCTGAAATAGAAGGAATCTTTTCGATTGAGGATCCGGTGAACCGGGAGTTAAATGCG
TTGTTTGAGGAACTTGATCTGCCTAAAATTGAAGAAGGGACCGTTTTGCTTCGTCGGGAGATCACCAATCAGGGGAAGAG
CATCTGCCGGATCAATGGCAAACTGACGACGCTCGGAATTCTGAGACAGGTTGGGCAAACGCTTGTGGATATTCATGGCC
AGCATGAGCACCAGCGTTTGCTGCAACAGGATCAGCACGTCGGCTTTTTGGACCGGTTTGCAGGGAAGCCGGTTGAAAAG
GCAAAAAAAGAATATGGTGTTTTGTATAAACAATATATGCAAAAAAGGAAACAACTGCATCAGTTCTCCGATAATGAACA
GCAGCTTGCCCAGAGGCTCGATTTGCTGCAGTATCAATACAACGAGATTTCAGATGCGGATCTCAGTCCGGGTGAAGATG
AAGAACTGCTTGAGGAGAAAAAACTCCTTGAAAATAGCGAGCATCTCTACAATGCTGTAAGGGGCTCTTACGACGCCCTT
TATGGTGACGGGAAAGGTCTTGAGTGGGTAATGACTGCGATGAATCAGCTCAGTGAAGCAGCTGAAGTCGACGACAAACT
CGCTTCTCTGAACGAGTCAGTAACAAATCAGTACTACCTCCTCGAGGAAGCATCTTTTTCTCTCAGAGATTATTTTGAAA
CCATCACCTTTGATTCAGAGCGATTGCAGGTTATTGAGGACCGGCTGTCAGAAATTCAGCAGTTAAAGAGAAAATACGGA
GCAACTGTTAATGACATACTTGAATATGCTTCGAGGGTTGAAGAGGAGATCGATGCATTGTCCAATCGGGAGCAACGCAT
CGAAGAATGGCAGGAAGAAGTGGCAGCTCTTCGCAAAGATCTCATCCTTGAAGGAACACATTTACATGAACAGCGGAAAA
AAGCCGCCGGGAAACTGGAAAAAGCGATTCAGACTCAGCTGAAAGAACTCTATATGAAAGATACCGTCTTTGATGTTAAG
ATTGATACAGGAGACCTTGAAAGCGGAGATGAGGCCATAACAAAAGAAGGCATCGACAAGGTGTCATTTCAGGTTGCCAC
AAACAAAGGAGAACCATTAAAATCCTTGGCAAAAATCGCTTCCGGTGGTGAAATTTCGAGGATGATACTGGCGCTGAAGA
CAATCCTCTCAAAACATGAAGGTGTCACATCACTGATTTTTGATGAAGTGGATACCGGTGTCAGTGGCAGAGTCGCTCAG
GCGATAGCAGAAAAGATCCATCGGATATCCGGTAATTCACAGGTGCTTTGCATCACCCATTTGCCTCAGGTGGCGGCGAT
GGCAGACACACATATGTTCATCTCGAAAGAATCAAAGCAAAACCGAACAATCACCAGAGTTGAGGCTCTCTCTGCAAAAG
ATAAAACCGAAGAAATAAGCCGGATGATATCCGGTGTTGAAATTACGGACTTAACAAGACAACACGCGAATGAACTGATT
GCACAGGCAGATCGCATGAAGGAAGAATAG

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(2-520)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB D6XVM7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

51.813

100

0.527

Multiple sequence alignment