Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   BSEL_RS11505 Genome accession   NC_014219
Coordinates   2483651..2484430 (-) Length   259 a.a.
NCBI ID   WP_013173186.1    Uniprot ID   D6XVM6
Organism   [Bacillus] selenitireducens MLS10     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2478651..2489430
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSEL_RS11485 (Bsel_2256) bcd 2478988..2480088 (-) 1101 WP_013173182.1 branched-chain amino acid dehydrogenase -
  BSEL_RS11490 (Bsel_2257) - 2480116..2481027 (-) 912 WP_013173183.1 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase -
  BSEL_RS11495 (Bsel_2258) - 2481164..2483227 (-) 2064 WP_013173184.1 sigma-54-dependent Fis family transcriptional regulator -
  BSEL_RS11500 (Bsel_2259) - 2483374..2483631 (+) 258 WP_013173185.1 DUF2627 domain-containing protein -
  BSEL_RS11505 (Bsel_2260) spo0A 2483651..2484430 (-) 780 WP_013173186.1 sporulation transcription factor Spo0A Regulator
  BSEL_RS11510 (Bsel_2261) recN 2484550..2486259 (-) 1710 WP_013173187.1 DNA repair protein RecN Machinery gene
  BSEL_RS11515 (Bsel_2262) ahrC 2486279..2486728 (-) 450 WP_013173188.1 transcriptional regulator AhrC/ArgR -
  BSEL_RS11520 (Bsel_2263) - 2486850..2487656 (-) 807 WP_013173189.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 259 a.a.        Molecular weight: 29785.28 Da        Isoelectric Point: 6.1311

>NTDB_id=37491 BSEL_RS11505 WP_013173186.1 2483651..2484430(-) (spo0A) [[Bacillus] selenitireducens MLS10]
MADKLRIAIADDNRELIELVDEHMKAQDDMTLVAHAYNGQECMKMVKQTEMDILILDIIMPHMDGMSVLEEIQTINEMER
PKVIMLTAFGHEEYTRKAVELGASYYVLKPFDMDTLMKKVKQVSDLPKNGRLSESATKINHESLDQSISHLLREIGVPAH
IKGYHYIKEAIELVHRNVDVLNSITKVLYPEVAKRFDTTPSRVERAIRHAIEVAWGRGDVDVIAETFSHTINRAKSKPTN
SEFIAMVSERIRREWSERE

Nucleotide


Download         Length: 780 bp        

>NTDB_id=37491 BSEL_RS11505 WP_013173186.1 2483651..2484430(-) (spo0A) [[Bacillus] selenitireducens MLS10]
ATGGCGGATAAACTACGTATTGCGATCGCAGATGATAACAGGGAATTGATCGAACTTGTCGATGAACACATGAAGGCACA
GGATGACATGACTTTGGTCGCCCATGCTTATAACGGTCAAGAATGTATGAAAATGGTCAAGCAGACGGAGATGGATATTC
TCATTTTGGATATCATTATGCCTCACATGGACGGTATGTCCGTCCTGGAAGAAATTCAGACCATCAACGAAATGGAGCGG
CCCAAAGTGATCATGCTTACAGCATTTGGTCATGAAGAATACACGAGAAAAGCAGTCGAACTTGGTGCATCTTATTACGT
ATTGAAGCCGTTTGATATGGATACACTGATGAAGAAGGTTAAACAGGTATCGGATCTGCCGAAAAATGGACGTCTTTCGG
AATCGGCAACGAAAATCAACCATGAATCTCTCGATCAGTCCATCTCGCACCTGTTGCGTGAGATTGGTGTGCCTGCGCAT
ATTAAAGGCTATCATTACATTAAAGAAGCGATCGAACTGGTTCACCGGAATGTGGATGTCTTAAATTCCATTACAAAAGT
TCTGTATCCGGAAGTGGCCAAACGTTTTGATACGACGCCAAGTCGCGTTGAACGCGCCATCCGTCATGCGATTGAAGTCG
CATGGGGACGCGGGGATGTCGATGTGATTGCGGAGACATTCAGTCATACGATAAACAGGGCCAAGTCAAAACCGACTAAT
TCGGAGTTTATTGCCATGGTCTCTGAGCGGATTCGCCGCGAATGGTCGGAACGTGAATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-121)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(148-251)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB D6XVM6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

49.815

100

0.521

Multiple sequence alignment