Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   G8B39_RS02140 Genome accession   NZ_CP049693
Coordinates   415460..416494 (+) Length   344 a.a.
NCBI ID   WP_010922583.1    Uniprot ID   A0A0H2UWB0
Organism   Streptococcus pyogenes strain ABC155     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 410460..421494
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G8B39_RS02110 (G8B39_02115) tsaE 411525..411986 (+) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  G8B39_RS02115 (G8B39_02120) - 411961..412485 (+) 525 WP_002994338.1 GNAT family N-acetyltransferase -
  G8B39_RS02120 (G8B39_02125) - 412494..413777 (+) 1284 WP_002983372.1 LCP family protein -
  G8B39_RS02125 (G8B39_02130) - 413888..414244 (-) 357 WP_002983373.1 hypothetical protein -
  G8B39_RS02130 (G8B39_02135) - 414241..414660 (-) 420 WP_002983376.1 HIT family protein -
  G8B39_RS02135 (G8B39_02140) pptA 414732..415457 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  G8B39_RS02140 (G8B39_02145) pptB 415460..416494 (+) 1035 WP_010922583.1 ABC transporter permease Regulator
  G8B39_RS02145 (G8B39_02150) ccrZ 416558..417349 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  G8B39_RS02150 (G8B39_02155) trmB 417349..417984 (+) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  G8B39_RS02160 (G8B39_02165) rimP 418243..418779 (+) 537 WP_011528897.1 ribosome maturation factor RimP -
  G8B39_RS02165 (G8B39_02170) nusA 418954..420111 (+) 1158 WP_002983485.1 transcription termination factor NusA -
  G8B39_RS02170 (G8B39_02175) rnpM 420127..420423 (+) 297 WP_002983486.1 RNase P modulator RnpM -
  G8B39_RS02175 (G8B39_02180) - 420416..420718 (+) 303 WP_002983488.1 YlxQ-related RNA-binding protein -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40274.52 Da        Isoelectric Point: 10.3713

>NTDB_id=374769 G8B39_RS02140 WP_010922583.1 415460..416494(+) (pptB) [Streptococcus pyogenes strain ABC155]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=374769 G8B39_RS02140 WP_010922583.1 415460..416494(+) (pptB) [Streptococcus pyogenes strain ABC155]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTTTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(158-330)

Bacterial ABC transporter protein EcsB (EcsB)

(2-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UWB0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43
  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427