Detailed information NTG0374635

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: G8B41_RS08880
• Genome accession: NZ_CP049691
• Coordinates: 1808061..1809167 (+)
• Length: 368 a.a.
• NCBI ID: WP_011529146.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain ABC199
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1803061..1814167

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G8B41_RS08855 (G8B41_08930)	pgsA	1803170..1803712 (-)	543	WP_011185104.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
G8B41_RS08860 (G8B41_08935)	-	1803726..1804751 (-)	1026	WP_011529142.1	RodZ family helix-turn-helix domain-containing protein	-
G8B41_RS08865 (G8B41_08940)	yfmH	1804801..1806090 (-)	1290	WP_011529143.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
G8B41_RS08870 (G8B41_08945)	yfmF	1806092..1807336 (-)	1245	WP_011529144.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
G8B41_RS08875 (G8B41_08950)	yaaA	1807646..1808059 (+)	414	WP_021299130.1	S4 domain-containing protein YaaA	-
G8B41_RS08880 (G8B41_08955)	recF	1808061..1809167 (+)	1107	WP_011529146.1	DNA replication/repair protein RecF	Machinery gene
G8B41_RS08885 (G8B41_08960)	-	1809223..1810086 (-)	864	WP_060388547.1	GRP family sugar transporter	-
G8B41_RS08890 (G8B41_08965)	guaB	1810289..1811770 (-)	1482	WP_011529148.1	IMP dehydrogenase	-
G8B41_RS08895 (G8B41_08970)	trpS	1812078..1813100 (-)	1023	WP_011529149.1	tryptophan--tRNA ligase	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 41844.78 Da
• Isoelectric Point: 7.8294

>NTDB_id=374635 G8B41_RS08880 WP_011529146.1 1808061..1809167(+) (recF) [Streptococcus pyogenes strain ABC199]
MWIKELELKHYRNYDHLLASFSSGLNVFIGNNAQGKTNFLEAIYFLSLTRSHRTRADKELIHFDHSTVSLTGKIQRISGT
VDLEINLSDKGRVTKINALKQAKLSDYIGTMMVVLFAPEDLQLVKGAPSLRRKFIDIDLGQIKPVYLFELSHYNHVLKQR
NSYLKSAQQIDAAFLAVLDEQLASYGARVMEHRIDFINALEKEANTHHQAISNGLESLSLSYQSSVVFDKKTSIYQQFLH
QLEKNHQKDFFRKNTSVGPHRDDLAFYINGMNANFASQGQHRSLILSLKMAEVSLMKALTGDNPILLLDDVMSELDNTRQ
TKLLETVIKENVQTFITTTSLDHLSQLPEGIRIFHVTKGTVQVDSDIH

Nucleotide

• Length: 1107 bp

>NTDB_id=374635 G8B41_RS08880 WP_011529146.1 1808061..1809167(+) (recF) [Streptococcus pyogenes strain ABC199]
ATGTGGATTAAAGAGTTAGAGTTAAAACATTATCGCAATTATGACCACCTGCTTGCCTCATTTTCGTCGGGTTTAAATGT
CTTTATCGGTAATAATGCTCAAGGAAAAACCAATTTTCTCGAGGCAATCTATTTTCTATCACTTACTAGAAGTCATCGCA
CGAGGGCTGATAAAGAATTGATTCATTTTGATCACTCAACTGTTTCTCTTACTGGTAAGATTCAGCGTATTAGTGGTACT
GTTGATTTAGAAATCAATCTATCAGATAAAGGACGTGTGACAAAGATTAATGCGCTAAAGCAAGCAAAATTATCTGATTA
TATTGGAACGATGATGGTTGTGCTTTTCGCACCAGAAGATTTGCAACTAGTTAAGGGAGCACCTAGCCTTCGTCGCAAAT
TTATCGACATTGACCTTGGTCAAATTAAGCCTGTTTACTTATTTGAGTTATCCCATTATAACCACGTGCTTAAACAGCGT
AATAGCTATTTAAAAAGTGCCCAACAAATTGATGCCGCTTTTCTAGCTGTTCTAGATGAGCAATTAGCTAGCTATGGAGC
CCGTGTCATGGAACATCGTATTGATTTTATCAATGCGTTAGAGAAAGAAGCAAATACTCATCACCAAGCCATCTCAAATG
GTTTAGAAAGTCTCTCTCTCTCCTATCAGTCGTCAGTTGTCTTTGACAAAAAAACTAGTATTTACCAACAATTTTTACAC
CAACTTGAAAAAAATCATCAGAAAGATTTCTTCCGTAAAAACACTAGTGTTGGTCCACATCGCGATGACTTAGCCTTTTA
CATTAACGGGATGAATGCTAACTTTGCTAGTCAAGGTCAGCACCGCAGCCTTATTCTTTCCTTAAAAATGGCTGAAGTTA
GTTTAATGAAGGCCTTGACTGGAGATAATCCCATTCTTTTACTAGACGATGTCATGAGCGAGCTAGACAATACACGACAA
ACAAAGTTACTTGAAACAGTAATTAAAGAAAATGTCCAAACCTTTATCACAACAACAAGTTTGGATCACCTGTCACAGTT
GCCAGAAGGTATCCGTATTTTTCACGTGACAAAAGGAACCGTTCAAGTTGATTCTGACATTCACTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-360)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	62.568	99.457	0.622
recF	Bacillus subtilis subsp. subtilis str. 168	45.013	100	0.454