Detailed information
Bioinformatically predicted
Overview
| Name | comZ | Type | Machinery gene |
| Locus tag | MESIL_RS20615 | Genome accession | NC_014212 |
| Coordinates | 1028888..1029316 (+) | Length | 142 a.a. |
| NCBI ID | WP_013157525.1 | Uniprot ID | D7BD26 |
| Organism | Allomeiothermus silvanus DSM 9946 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1023888..1034316
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MESIL_RS21420 (Mesil_1035) | - | 1024331..1025421 (+) | 1091 | Protein_1046 | ISAs1 family transposase | - |
| MESIL_RS05245 (Mesil_1036) | - | 1025538..1026221 (-) | 684 | WP_013157522.1 | response regulator transcription factor | - |
| MESIL_RS05250 (Mesil_1037) | - | 1026418..1027647 (-) | 1230 | WP_013157523.1 | DUF5666 domain-containing protein | - |
| MESIL_RS05255 (Mesil_1038) | dusA | 1027694..1028731 (-) | 1038 | WP_013157524.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| MESIL_RS20615 (Mesil_1039) | comZ | 1028888..1029316 (+) | 429 | WP_013157525.1 | hypothetical protein | Machinery gene |
| MESIL_RS05265 (Mesil_1040) | ispH | 1029333..1030364 (-) | 1032 | WP_013157526.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| MESIL_RS05270 (Mesil_1041) | dprA | 1030462..1031478 (-) | 1017 | WP_013157527.1 | DNA-processing protein DprA | Machinery gene |
| MESIL_RS05275 (Mesil_1042) | era | 1031583..1032476 (+) | 894 | WP_013157528.1 | GTPase Era | - |
| MESIL_RS05280 (Mesil_1043) | - | 1032478..1033104 (+) | 627 | WP_013157529.1 | PIG-L deacetylase family protein | - |
| MESIL_RS05285 (Mesil_1044) | - | 1033176..1034060 (+) | 885 | WP_013157530.1 | acyltransferase | - |
Sequence
Protein
Download Length: 142 a.a. Molecular weight: 15122.04 Da Isoelectric Point: 5.8010
>NTDB_id=37440 MESIL_RS20615 WP_013157525.1 1028888..1029316(+) (comZ) [Allomeiothermus silvanus DSM 9946]
MTPLVERQNASLVVEKLDSSDTLGGNLDLDGSLLPDAAGGNAYFPNHVLAVIAEGDTYQRGQYVMAPVYSGGTFRIVKDN
VLLGSVISNMFCTTSAGNQASCNAGQKSEVVYINTAGNVPAALRPIQYRGSATFKLLSYERR
MTPLVERQNASLVVEKLDSSDTLGGNLDLDGSLLPDAAGGNAYFPNHVLAVIAEGDTYQRGQYVMAPVYSGGTFRIVKDN
VLLGSVISNMFCTTSAGNQASCNAGQKSEVVYINTAGNVPAALRPIQYRGSATFKLLSYERR
Nucleotide
Download Length: 429 bp
>NTDB_id=37440 MESIL_RS20615 WP_013157525.1 1028888..1029316(+) (comZ) [Allomeiothermus silvanus DSM 9946]
GTGACTCCCCTGGTCGAGCGGCAAAACGCTTCGTTGGTGGTGGAGAAGCTGGATTCCAGTGATACCCTGGGGGGCAACCT
TGACCTGGACGGAAGCCTGCTCCCCGATGCGGCTGGGGGGAATGCGTACTTCCCCAACCACGTCTTGGCCGTGATTGCCG
AGGGGGACACCTATCAGCGCGGCCAGTACGTGATGGCGCCGGTCTACTCCGGGGGCACCTTCCGCATTGTTAAAGATAAC
GTGCTGTTGGGTTCGGTGATCAGCAACATGTTCTGCACCACCAGCGCGGGTAACCAGGCCAGTTGTAACGCAGGCCAAAA
ATCCGAGGTGGTCTACATCAACACCGCCGGGAATGTGCCAGCAGCGCTACGGCCCATCCAATACCGTGGATCAGCCACGT
TCAAGCTCCTCTCGTATGAGCGCCGCTAG
GTGACTCCCCTGGTCGAGCGGCAAAACGCTTCGTTGGTGGTGGAGAAGCTGGATTCCAGTGATACCCTGGGGGGCAACCT
TGACCTGGACGGAAGCCTGCTCCCCGATGCGGCTGGGGGGAATGCGTACTTCCCCAACCACGTCTTGGCCGTGATTGCCG
AGGGGGACACCTATCAGCGCGGCCAGTACGTGATGGCGCCGGTCTACTCCGGGGGCACCTTCCGCATTGTTAAAGATAAC
GTGCTGTTGGGTTCGGTGATCAGCAACATGTTCTGCACCACCAGCGCGGGTAACCAGGCCAGTTGTAACGCAGGCCAAAA
ATCCGAGGTGGTCTACATCAACACCGCCGGGAATGTGCCAGCAGCGCTACGGCCCATCCAATACCGTGGATCAGCCACGT
TCAAGCTCCTCTCGTATGAGCGCCGCTAG
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comZ | Thermus thermophilus HB27 |
62.222 |
95.07 |
0.592 |