Detailed information NTG0374344

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: G8B44_RS09375
• Genome accession: NZ_CP049688
• Coordinates: 1870097..1871203 (+)
• Length: 368 a.a.
• NCBI ID: WP_011529146.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain ABC245
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1865097..1876203

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G8B44_RS09350 (G8B44_09425)	pgsA	1865206..1865748 (-)	543	WP_011185104.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
G8B44_RS09355 (G8B44_09430)	-	1865762..1866787 (-)	1026	WP_011529142.1	RodZ family helix-turn-helix domain-containing protein	-
G8B44_RS09360 (G8B44_09435)	yfmH	1866837..1868126 (-)	1290	WP_011529143.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
G8B44_RS09365 (G8B44_09440)	yfmF	1868128..1869372 (-)	1245	WP_011529144.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
G8B44_RS09370 (G8B44_09445)	yaaA	1869682..1870095 (+)	414	WP_021299130.1	S4 domain-containing protein YaaA	-
G8B44_RS09375 (G8B44_09450)	recF	1870097..1871203 (+)	1107	WP_011529146.1	DNA replication/repair protein RecF	Machinery gene
G8B44_RS09380 (G8B44_09455)	-	1871259..1872122 (-)	864	WP_060388547.1	GRP family sugar transporter	-
G8B44_RS09385 (G8B44_09460)	guaB	1872325..1873806 (-)	1482	WP_011529148.1	IMP dehydrogenase	-
G8B44_RS09390 (G8B44_09465)	trpS	1874114..1875136 (-)	1023	WP_011529149.1	tryptophan--tRNA ligase	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 41844.78 Da
• Isoelectric Point: 7.8294

>NTDB_id=374344 G8B44_RS09375 WP_011529146.1 1870097..1871203(+) (recF) [Streptococcus pyogenes strain ABC245]
MWIKELELKHYRNYDHLLASFSSGLNVFIGNNAQGKTNFLEAIYFLSLTRSHRTRADKELIHFDHSTVSLTGKIQRISGT
VDLEINLSDKGRVTKINALKQAKLSDYIGTMMVVLFAPEDLQLVKGAPSLRRKFIDIDLGQIKPVYLFELSHYNHVLKQR
NSYLKSAQQIDAAFLAVLDEQLASYGARVMEHRIDFINALEKEANTHHQAISNGLESLSLSYQSSVVFDKKTSIYQQFLH
QLEKNHQKDFFRKNTSVGPHRDDLAFYINGMNANFASQGQHRSLILSLKMAEVSLMKALTGDNPILLLDDVMSELDNTRQ
TKLLETVIKENVQTFITTTSLDHLSQLPEGIRIFHVTKGTVQVDSDIH

Nucleotide

• Length: 1107 bp

>NTDB_id=374344 G8B44_RS09375 WP_011529146.1 1870097..1871203(+) (recF) [Streptococcus pyogenes strain ABC245]
ATGTGGATTAAAGAGTTAGAGTTAAAACATTATCGCAATTATGACCACCTGCTTGCCTCATTTTCGTCGGGTTTAAATGT
CTTTATCGGTAATAATGCTCAAGGAAAAACCAATTTTCTCGAGGCAATCTATTTTCTATCACTTACTAGAAGTCATCGCA
CGAGGGCTGATAAAGAATTGATTCATTTTGATCACTCAACTGTTTCTCTTACTGGTAAGATTCAGCGTATTAGTGGTACT
GTTGATTTAGAAATCAATCTATCAGATAAAGGACGTGTGACAAAGATTAATGCGCTAAAGCAAGCAAAATTATCTGATTA
TATTGGAACGATGATGGTTGTGCTTTTCGCACCAGAAGATTTGCAACTAGTTAAGGGAGCACCTAGCCTTCGTCGCAAAT
TTATCGACATTGACCTTGGTCAAATTAAGCCTGTTTACTTATTTGAGTTATCCCATTATAACCACGTGCTTAAACAGCGT
AATAGCTATTTAAAAAGTGCCCAACAAATTGATGCCGCTTTTCTAGCTGTTCTAGATGAGCAATTAGCTAGCTATGGAGC
CCGTGTCATGGAACATCGTATTGATTTTATCAATGCGTTAGAGAAAGAAGCAAATACTCATCACCAAGCCATCTCAAATG
GTTTAGAAAGTCTCTCTCTCTCCTATCAGTCGTCAGTTGTCTTTGACAAAAAAACTAGTATTTACCAACAATTTTTACAC
CAACTTGAAAAAAATCATCAGAAAGATTTCTTCCGTAAAAACACTAGTGTTGGTCCACATCGCGATGACTTAGCCTTTTA
CATTAACGGGATGAATGCTAACTTTGCTAGTCAAGGTCAGCACCGCAGCCTTATTCTTTCCTTAAAAATGGCTGAAGTTA
GTTTAATGAAGGCCTTGACTGGAGATAATCCCATTCTTTTACTAGACGATGTCATGAGCGAGCTAGACAATACACGACAA
ACAAAGTTACTTGAAACAGTAATTAAAGAAAATGTCCAAACCTTTATCACAACAACAAGTTTGGATCACCTGTCACAGTT
GCCAGAAGGTATCCGTATTTTTCACGTGACAAAAGGAACCGTTCAAGTTGATTCTGACATTCACTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-360)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	62.568	99.457	0.622
recF	Bacillus subtilis subsp. subtilis str. 168	45.013	100	0.454