Detailed information NTG0374327

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: FOV14_RS16640
• Genome accession: NZ_CP041784
• Coordinates: 3403838..3405001 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain IM1
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3398838..3410001

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOV14_RS16610 (FOV14_16765)	-	3399103..3399522 (-)	420	WP_057080259.1	TIGR03826 family flagellar region protein	-
FOV14_RS16615 (FOV14_16770)	comFC	3399596..3400285 (-)	690	WP_196616643.1	phosphoribosyltransferase family protein	Machinery gene
FOV14_RS16620 (FOV14_16775)	-	3400291..3400575 (-)	285	WP_057080260.1	competence protein ComFB	-
FOV14_RS16625 (FOV14_16780)	comFA	3400633..3402018 (-)	1386	WP_057080261.1	DEAD/DEAH box helicase	Machinery gene
FOV14_RS16630 (FOV14_16785)	-	3402126..3402974 (-)	849	WP_003151387.1	DegV family protein	-
FOV14_RS16635 (FOV14_16790)	degU	3403072..3403761 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
FOV14_RS16640 (FOV14_16795)	degS	3403838..3405001 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
FOV14_RS16645 (FOV14_16800)	-	3405224..3405871 (+)	648	WP_003151384.1	YigZ family protein	-
FOV14_RS16650 (FOV14_16805)	-	3405876..3407090 (+)	1215	WP_014305930.1	LCP family protein	-
FOV14_RS16655 (FOV14_16810)	-	3407180..3408256 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
FOV14_RS16660 (FOV14_16815)	-	3408389..3409585 (-)	1197	WP_069449044.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=374327 FOV14_RS16640 WP_003151385.1 3403838..3405001(-) (degS) [Bacillus velezensis strain IM1]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=374327 FOV14_RS16640 WP_003151385.1 3403838..3405001(-) (degS) [Bacillus velezensis strain IM1]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTGAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCTACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948