Detailed information NTG0374215

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: FPJ27_RS33560
• Genome accession: NZ_CP041779
• Coordinates: 3132184..3133338 (+)
• Length: 384 a.a.
• NCBI ID: WP_072444699.1
• Uniprot ID: A0A1K1STL3
• Organism: Burkholderia sp. MS455
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3127184..3138338

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FPJ27_RS33530 (FPJ27_34580)	-	3127816..3128424 (+)	609	WP_034179070.1	50S ribosomal protein L25/general stress protein Ctc	-
FPJ27_RS33535 (FPJ27_34590)	pth	3128545..3129144 (+)	600	WP_034179071.1	aminoacyl-tRNA hydrolase	-
FPJ27_RS33540 (FPJ27_34595)	hisC	3129268..3130335 (+)	1068	WP_204424579.1	histidinol-phosphate transaminase	-
FPJ27_RS33545 (FPJ27_34600)	-	3130418..3130684 (-)	267	WP_034179073.1	YfhL family 4Fe-4S dicluster ferredoxin	-
FPJ27_RS33550 (FPJ27_34605)	coaD	3130744..3131241 (-)	498	WP_031403077.1	pantetheine-phosphate adenylyltransferase	-
FPJ27_RS33555 (FPJ27_34610)	rsmD	3131353..3131967 (-)	615	WP_204424581.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
FPJ27_RS33560 (FPJ27_34615)	pilA	3132184..3133338 (+)	1155	WP_072444699.1	signal recognition particle-docking protein FtsY	Machinery gene
FPJ27_RS33565 (FPJ27_34620)	maiA	3133410..3134054 (-)	645	WP_072444701.1	maleylacetoacetate isomerase	-
FPJ27_RS33570 (FPJ27_34625)	ybiB	3134249..3135223 (+)	975	WP_204424585.1	DNA-binding protein YbiB	-
FPJ27_RS33575 (FPJ27_34630)	leuA	3135604..3137253 (+)	1650	WP_204424588.1	2-isopropylmalate synthase	-
FPJ27_RS33580 (FPJ27_34635)	-	3137385..3137768 (-)	384	WP_034179077.1	nuclear transport factor 2 family protein	-

Sequence

Protein

• Length: 384 a.a.
• Molecular weight: 41100.99 Da
• Isoelectric Point: 4.7431

>NTDB_id=374215 FPJ27_RS33560 WP_072444699.1 3132184..3133338(+) (pilA) [Burkholderia sp. MS455]
MFSFFKRFKKTQEPDPAESQSADAQQTDEPSEAPALEAPPAADVPQAPVQPAAPAVVMTVTPTNDGRDEVVETVEIVPPP
LQDASAKQSWLARLKTGLAKTGNSITGVFVNTKIDEDLYEELETALLMSDAGVDATEYLLDALREKVRTGRLTDPQQVKS
ALHDLLVELLKPLEKSLMLGRAQPLVMMITGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAVWGERNNV
TVVQQESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVISKAHDGSPHEVLLVIDANTGQNALTQ
VKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAVEFADALLG

Nucleotide

• Length: 1155 bp

>NTDB_id=374215 FPJ27_RS33560 WP_072444699.1 3132184..3133338(+) (pilA) [Burkholderia sp. MS455]
ATGTTCAGCTTCTTCAAACGATTCAAGAAAACGCAGGAGCCCGATCCCGCGGAATCGCAATCGGCCGACGCGCAGCAAAC
GGACGAGCCGTCCGAGGCGCCCGCGCTCGAGGCTCCGCCCGCGGCCGACGTGCCGCAGGCGCCCGTGCAACCGGCCGCGC
CGGCCGTCGTGATGACGGTCACGCCGACCAACGACGGCCGCGACGAAGTCGTCGAGACGGTCGAAATCGTCCCGCCGCCG
CTGCAGGATGCATCCGCGAAGCAATCGTGGCTTGCGCGCCTGAAAACGGGGCTCGCGAAAACGGGCAACAGCATCACCGG
CGTATTCGTCAACACGAAGATCGACGAGGATCTGTACGAGGAACTCGAAACCGCGCTGCTGATGTCCGACGCGGGCGTCG
ACGCGACCGAGTACCTGCTCGACGCGCTGCGCGAAAAGGTGCGCACCGGCCGGCTGACCGACCCGCAGCAGGTGAAGAGT
GCGCTGCACGACCTGCTCGTCGAGCTGCTGAAGCCGCTCGAGAAATCGCTGATGCTCGGCCGCGCACAGCCGCTCGTGAT
GATGATCACCGGCGTGAACGGCGCGGGCAAGACCACCAGCATCGGCAAGCTCGCGAAGCATCTGCAGAGCTTCGACCAGT
CGGTGCTGCTGGCTGCGGGCGATACGTTCCGCGCGGCCGCGCGCGAACAGCTGGCGGTCTGGGGCGAGCGCAACAACGTG
ACGGTCGTGCAGCAGGAAAGCGGCGATCCGGCCGCGGTGATCTTCGACGCGGTCAGCGCCGCGCGCGCACGCAAGATCGA
TGTGATGATGGCCGACACGGCCGGCCGCCTGCCGACGCAGCTCCACCTGATGGAAGAGTTGAAGAAGGTGAAGCGCGTGA
TCTCGAAGGCGCACGACGGCTCGCCGCACGAAGTGCTGCTGGTGATCGACGCGAACACCGGCCAGAACGCGCTCACGCAG
GTGAAGGCATTCGACGACGCGCTCGGCCTCACGGGACTCATCGTCACGAAGCTCGACGGCACCGCGAAGGGCGGGATTCT
CGCCGCGATCGCGCGGCAGCGCCCGGTGCCCGTCTACTTCATCGGCGTCGGCGAGAAGGTCGAGGACCTGCAGCCGTTCA
GCGCCGTGGAATTCGCGGACGCGCTGCTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (102-164)

• SRP54-type protein, GTPase domain (SRP54) (185-384)

3D structure

• AlphaFold DB: A0A1K1STL3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.957	100	0.586