Detailed information NTG0374053

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: G8B47_RS09160
• Genome accession: NZ_CP049685
• Coordinates: 1850254..1851360 (+)
• Length: 368 a.a.
• NCBI ID: WP_011529146.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain TSPY806
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1845254..1856360

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G8B47_RS09135 (G8B47_09215)	pgsA	1845363..1845905 (-)	543	WP_011185104.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
G8B47_RS09140 (G8B47_09220)	-	1845919..1846944 (-)	1026	WP_011529142.1	RodZ family helix-turn-helix domain-containing protein	-
G8B47_RS09145 (G8B47_09225)	yfmH	1846994..1848283 (-)	1290	WP_011529143.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
G8B47_RS09150 (G8B47_09230)	yfmF	1848285..1849529 (-)	1245	WP_011529144.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
G8B47_RS09155 (G8B47_09235)	yaaA	1849839..1850252 (+)	414	WP_021299130.1	S4 domain-containing protein YaaA	-
G8B47_RS09160 (G8B47_09240)	recF	1850254..1851360 (+)	1107	WP_011529146.1	DNA replication/repair protein RecF	Machinery gene
G8B47_RS09165 (G8B47_09245)	-	1851416..1852279 (-)	864	WP_060388547.1	GRP family sugar transporter	-
G8B47_RS09170 (G8B47_09250)	guaB	1852482..1853963 (-)	1482	WP_011529148.1	IMP dehydrogenase	-
G8B47_RS09175 (G8B47_09255)	trpS	1854271..1855293 (-)	1023	WP_011529149.1	tryptophan--tRNA ligase	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 41844.78 Da
• Isoelectric Point: 7.8294

>NTDB_id=374053 G8B47_RS09160 WP_011529146.1 1850254..1851360(+) (recF) [Streptococcus pyogenes strain TSPY806]
MWIKELELKHYRNYDHLLASFSSGLNVFIGNNAQGKTNFLEAIYFLSLTRSHRTRADKELIHFDHSTVSLTGKIQRISGT
VDLEINLSDKGRVTKINALKQAKLSDYIGTMMVVLFAPEDLQLVKGAPSLRRKFIDIDLGQIKPVYLFELSHYNHVLKQR
NSYLKSAQQIDAAFLAVLDEQLASYGARVMEHRIDFINALEKEANTHHQAISNGLESLSLSYQSSVVFDKKTSIYQQFLH
QLEKNHQKDFFRKNTSVGPHRDDLAFYINGMNANFASQGQHRSLILSLKMAEVSLMKALTGDNPILLLDDVMSELDNTRQ
TKLLETVIKENVQTFITTTSLDHLSQLPEGIRIFHVTKGTVQVDSDIH

Nucleotide

• Length: 1107 bp

>NTDB_id=374053 G8B47_RS09160 WP_011529146.1 1850254..1851360(+) (recF) [Streptococcus pyogenes strain TSPY806]
ATGTGGATTAAAGAGTTAGAGTTAAAACATTATCGCAATTATGACCACCTGCTTGCCTCATTTTCGTCGGGTTTAAATGT
CTTTATCGGTAATAATGCTCAAGGAAAAACCAATTTTCTCGAGGCAATCTATTTTCTATCACTTACTAGAAGTCATCGCA
CGAGGGCTGATAAAGAATTGATTCATTTTGATCACTCAACTGTTTCTCTTACTGGTAAGATTCAGCGTATTAGTGGTACT
GTTGATTTAGAAATCAATCTATCAGATAAAGGACGTGTGACAAAGATTAATGCGCTAAAGCAAGCAAAATTATCTGATTA
TATTGGAACGATGATGGTTGTGCTTTTCGCACCAGAAGATTTGCAACTAGTTAAGGGAGCACCTAGCCTTCGTCGCAAAT
TTATCGACATTGACCTTGGTCAAATTAAGCCTGTTTACTTATTTGAGTTATCCCATTATAACCACGTGCTTAAACAGCGT
AATAGCTATTTAAAAAGTGCCCAACAAATTGATGCCGCTTTTCTAGCTGTTCTAGATGAGCAATTAGCTAGCTATGGAGC
CCGTGTCATGGAACATCGTATTGATTTTATCAATGCGTTAGAGAAAGAAGCAAATACTCATCACCAAGCCATCTCAAATG
GTTTAGAAAGTCTCTCTCTCTCCTATCAGTCGTCAGTTGTCTTTGACAAAAAAACTAGTATTTACCAACAATTTTTACAC
CAACTTGAAAAAAATCATCAGAAAGATTTCTTCCGTAAAAACACTAGTGTTGGTCCACATCGCGATGACTTAGCCTTTTA
CATTAACGGGATGAATGCTAACTTTGCTAGTCAAGGTCAGCACCGCAGCCTTATTCTTTCCTTAAAAATGGCTGAAGTTA
GTTTAATGAAGGCCTTGACTGGAGATAATCCCATTCTTTTACTAGACGATGTCATGAGCGAGCTAGACAATACACGACAA
ACAAAGTTACTTGAAACAGTAATTAAAGAAAATGTCCAAACCTTTATCACAACAACAAGTTTGGATCACCTGTCACAGTT
GCCAGAAGGTATCCGTATTTTTCACGTGACAAAAGGAACCGTTCAAGTTGATTCTGACATTCACTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-360)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	62.568	99.457	0.622
recF	Bacillus subtilis subsp. subtilis str. 168	45.013	100	0.454