Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | FNS63_RS14025 | Genome accession | NZ_CP041770 |
| Coordinates | 2847132..2847422 (-) | Length | 96 a.a. |
| NCBI ID | WP_169510469.1 | Uniprot ID | - |
| Organism | Bacillus amyloliquefaciens strain DH8030 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2842132..2852422
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FNS63_RS13985 (FNS63_13980) | darA | 2842149..2842478 (+) | 330 | WP_004264734.1 | cyclic di-AMP receptor DarA | - |
| FNS63_RS13990 (FNS63_13985) | - | 2842491..2842931 (+) | 441 | WP_004264730.1 | YaaR family protein | - |
| FNS63_RS13995 (FNS63_13990) | holB | 2842943..2843932 (+) | 990 | WP_007409919.1 | DNA polymerase III subunit delta' | - |
| FNS63_RS14000 (FNS63_13995) | ricT | 2843935..2844762 (+) | 828 | WP_004264723.1 | competence/sporulation regulator complex protein RicT | - |
| FNS63_RS14005 (FNS63_14000) | yabA | 2844777..2845136 (+) | 360 | WP_004264720.1 | replication initiation-control protein YabA | - |
| FNS63_RS14010 (FNS63_14005) | - | 2845197..2845940 (+) | 744 | WP_004264717.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| FNS63_RS14015 (FNS63_14010) | - | 2845927..2846226 (+) | 300 | WP_004264714.1 | GIY-YIG nuclease family protein | - |
| FNS63_RS14020 (FNS63_14015) | rsmI | 2846201..2847082 (+) | 882 | WP_014304192.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| FNS63_RS14025 (FNS63_14020) | abrB | 2847132..2847422 (-) | 291 | WP_169510469.1 | transition state genes transcriptional regulator AbrB | Regulator |
| FNS63_RS14030 (FNS63_14025) | metG | 2847905..2849896 (+) | 1992 | WP_004264704.1 | methionine--tRNA ligase | - |
| FNS63_RS14035 (FNS63_14030) | - | 2849972..2850739 (+) | 768 | WP_004264700.1 | TatD family hydrolase | - |
| FNS63_RS14040 (FNS63_14035) | - | 2850874..2852199 (+) | 1326 | WP_101312113.1 | G5 and 3D domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10753.57 Da Isoelectric Point: 6.3482
>NTDB_id=374042 FNS63_RS14025 WP_169510469.1 2847132..2847422(-) (abrB) [Bacillus amyloliquefaciens strain DH8030]
MLMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNQK
MLMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNQK
Nucleotide
Download Length: 291 bp
>NTDB_id=374042 FNS63_RS14025 WP_169510469.1 2847132..2847422(-) (abrB) [Bacillus amyloliquefaciens strain DH8030]
CTGTTAATGAAATCTACTGGTATCGTACGTAAAGTTGATGAACTTGGACGCGTCGTTATCCCTATCGAACTTCGCCGTAC
ACTGGGCATCGCAGAAAAAGACGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCCGGCGGCAAATTGGTACTCAGCAAAGAAGGC
GCTGAGCAAATCATCTCTGAAATTCAAAACCAGCTTCAAAACCAAAAATAA
CTGTTAATGAAATCTACTGGTATCGTACGTAAAGTTGATGAACTTGGACGCGTCGTTATCCCTATCGAACTTCGCCGTAC
ACTGGGCATCGCAGAAAAAGACGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCCGGCGGCAAATTGGTACTCAGCAAAGAAGGC
GCTGAGCAAATCATCTCTGAAATTCAAAACCAGCTTCAAAACCAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
97.917 |
100 |
0.979 |