Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   G6536_RS21950 Genome accession   NZ_CP049330
Coordinates   4275161..4275955 (-) Length   264 a.a.
NCBI ID   WP_003177960.1    Uniprot ID   A0ABY3FW26
Organism   Bacillus licheniformis strain CP6     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4270161..4280955
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G6536_RS21920 (G6536_22200) - 4270179..4270337 (-) 159 WP_003177948.1 CxxH/CxxC protein -
  G6536_RS21925 (G6536_22205) - 4270536..4271018 (-) 483 WP_009330015.1 DUF4234 domain-containing protein -
  G6536_RS21930 (G6536_22210) - 4271449..4271967 (-) 519 WP_011201784.1 GNAT family N-acetyltransferase -
  G6536_RS21935 (G6536_22215) - 4271998..4272468 (-) 471 WP_009330017.1 membrane protein -
  G6536_RS21940 (G6536_22220) - 4272725..4273570 (-) 846 WP_011198491.1 S-adenosyl-l-methionine hydroxide adenosyltransferase family protein -
  G6536_RS21945 (G6536_22225) htrA 4273867..4275078 (-) 1212 WP_017475028.1 trypsin-like peptidase domain-containing protein Regulator
  G6536_RS21950 (G6536_22230) vicX 4275161..4275955 (-) 795 WP_003177960.1 MBL fold metallo-hydrolase Regulator
  G6536_RS21955 (G6536_22235) yycI 4275970..4276818 (-) 849 WP_003177962.1 two-component system regulatory protein YycI -
  G6536_RS21960 (G6536_22240) yycH 4276805..4278169 (-) 1365 WP_003177963.1 two-component system activity regulator YycH -
  G6536_RS21965 (G6536_22245) walK 4278159..4280003 (-) 1845 WP_003177965.1 cell wall metabolism sensor histidine kinase WalK -
  G6536_RS21970 (G6536_22250) walR 4280011..4280718 (-) 708 WP_003177967.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29219.18 Da        Isoelectric Point: 5.7678

>NTDB_id=373642 G6536_RS21950 WP_003177960.1 4275161..4275955(-) (vicX) [Bacillus licheniformis strain CP6]
MSLQFSVLASGSTGNALYLETDDHAFLVDAGLSGKAMEGLMAQIDRKLDQLDGIFVTHEHSDHIKGLGVLARKYELPVYA
NEKTWKAMEGHIGKMDNGQKFVFPMETVKSFGSLDVESFGVSHDAAEPMFYVFHYNGRKLALITDTGYVSDRMKGIIRSA
NAFVFESNHDVGMLQMGRYPWNIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLAAK
GFAAGETFDLYDTDPKKPTPLVAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=373642 G6536_RS21950 WP_003177960.1 4275161..4275955(-) (vicX) [Bacillus licheniformis strain CP6]
ATGAGCCTGCAATTTAGCGTACTTGCGAGCGGGAGTACCGGTAATGCTTTATATTTGGAAACCGATGACCACGCTTTTTT
AGTTGACGCAGGACTTAGCGGGAAGGCGATGGAAGGGCTGATGGCGCAAATTGATCGAAAGCTTGATCAGCTCGACGGCA
TCTTTGTTACACATGAGCACAGTGACCATATAAAAGGGCTTGGCGTGCTGGCAAGAAAATATGAGCTGCCCGTTTACGCC
AATGAAAAAACGTGGAAGGCGATGGAAGGGCATATCGGCAAAATGGATAACGGCCAAAAGTTCGTTTTTCCAATGGAAAC
CGTCAAGTCATTCGGCTCCCTTGATGTCGAATCGTTCGGGGTATCCCATGATGCCGCAGAGCCGATGTTTTACGTTTTTC
ATTACAATGGCCGAAAGCTCGCTTTGATTACGGATACGGGCTATGTCAGCGACAGAATGAAAGGCATCATCCGCTCGGCA
AACGCTTTTGTTTTTGAAAGCAATCATGATGTCGGCATGCTGCAAATGGGCCGCTATCCGTGGAACATCAAGCGCCGGAT
TCTAAGCGACGTCGGACACGTATCCAATGAGGACGCGGCACTCGCAATGACCGATGTAATCGGCGATGAGACATCGAGAA
TTTATTTGGCTCATTTAAGCCAGGACAACAACATGAAAGAGCTGGCAAGAATGTCTGTGCAGCAAACGCTGGCTGCCAAA
GGATTTGCGGCAGGAGAAACGTTTGACTTATATGATACCGATCCTAAGAAACCGACGCCTCTCGTAGCGGTGTAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.053

99.242

0.527