Detailed information NTG0373593

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: FNU76_RS07670
• Genome accession: NZ_CP041730
• Coordinates: 1713525..1714706 (+)
• Length: 393 a.a.
• NCBI ID: WP_223879262.1
• Uniprot ID: -
• Organism: Chitinimonas arctica strain R3-44
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1708525..1719706

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FNU76_RS07650 (FNU76_07650)	purB	1709034..1710407 (+)	1374	WP_144277644.1	adenylosuccinate lyase	-
FNU76_RS07655 (FNU76_07655)	-	1710496..1711110 (+)	615	WP_223879261.1	PEP-CTERM sorting domain-containing protein	-
FNU76_RS07660 (FNU76_07660)	-	1711198..1712694 (+)	1497	WP_179958390.1	YdgA family protein	-
FNU76_RS07665 (FNU76_07665)	rsmD	1712759..1713331 (-)	573	WP_144277646.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
FNU76_RS07670 (FNU76_07670)	pilA	1713525..1714706 (+)	1182	WP_223879262.1	signal recognition particle-docking protein FtsY	Machinery gene
FNU76_RS07675 (FNU76_07675)	ftsE	1714740..1715390 (+)	651	WP_144277647.1	cell division ATP-binding protein FtsE	-
FNU76_RS07680 (FNU76_07680)	ftsX	1715406..1716311 (+)	906	WP_144277648.1	permease-like cell division protein FtsX	-
FNU76_RS07685 (FNU76_07685)	-	1716317..1716799 (-)	483	WP_144277649.1	nuclear transport factor 2 family protein	-
FNU76_RS07690 (FNU76_07690)	-	1716921..1717370 (-)	450	WP_144277650.1	GNAT family N-acetyltransferase	-
FNU76_RS07695 (FNU76_07695)	-	1717373..1717831 (-)	459	WP_144277651.1	rhodanese-like domain-containing protein	-
FNU76_RS07700 (FNU76_07700)	-	1717924..1719372 (+)	1449	WP_144277652.1	PLP-dependent aminotransferase family protein	-

Sequence

Protein

• Length: 393 a.a.
• Molecular weight: 41065.11 Da
• Isoelectric Point: 5.1543

>NTDB_id=373593 FNU76_RS07670 WP_223879262.1 1713525..1714706(+) (pilA) [Chitinimonas arctica strain R3-44]
MSDSQTPQDSQAGWGKKLWKALNTDVGSLVGGSAPAPAAPVAPPAPAAAPEPAPLATANAPVVEEKSFWQKTVEVLNTDV
TVLAKDVAQASKEVWQYKLKAGLAKTRDKLGKELAALFGGGQIDEDLYEELETVLLTADMGVDATVHLLKDVRQRVSLAG
LKDASELRGALKGALTDLIAPLEKPLVVEGHKPFIIMVAGVNGAGKTTSIGKLAKYFQGQGKSVLLAAGDTFRAAAREQL
AAWGERNNVTVIAQDGGDSAAVCFDAINAARARGIDIVLADTAGRLPTQLHLMDEIAKVKRVIAKADPTGPHEILLVLDA
NTGQNALQQVKAFDDALGLTGLVLTKLDGTAKGGVIAGIAKQKAIPLRFIGVGEGIDDLRPFEAADYVDALIE

Nucleotide

• Length: 1182 bp

>NTDB_id=373593 FNU76_RS07670 WP_223879262.1 1713525..1714706(+) (pilA) [Chitinimonas arctica strain R3-44]
ATGTCAGACAGCCAGACCCCGCAAGATTCGCAAGCCGGTTGGGGCAAAAAGCTCTGGAAGGCGCTCAATACGGACGTCGG
CAGCTTGGTCGGCGGCAGCGCCCCGGCGCCGGCCGCACCGGTGGCGCCGCCCGCGCCGGCAGCCGCACCGGAACCCGCCC
CCCTTGCCACGGCCAACGCGCCCGTCGTGGAAGAAAAATCCTTCTGGCAAAAAACCGTCGAGGTGCTCAATACCGATGTC
ACGGTATTGGCCAAGGATGTCGCCCAAGCTTCCAAGGAAGTCTGGCAGTACAAGCTGAAGGCCGGCCTGGCCAAGACCCG
CGACAAGCTGGGCAAGGAACTGGCTGCCCTGTTCGGCGGCGGCCAGATCGACGAAGACCTGTACGAAGAGCTGGAAACCG
TGCTGCTGACCGCCGACATGGGCGTGGACGCCACCGTGCACCTGCTCAAGGATGTACGCCAACGCGTTAGCCTGGCAGGG
TTGAAGGATGCCAGCGAACTGCGCGGCGCGCTCAAGGGTGCCCTGACCGATCTGATCGCGCCCCTGGAAAAACCTTTGGT
GGTCGAGGGCCACAAACCCTTCATCATCATGGTGGCGGGCGTCAACGGCGCCGGCAAGACCACCAGTATCGGCAAGTTGG
CCAAGTACTTCCAGGGCCAGGGCAAGAGCGTGCTGCTGGCCGCCGGCGATACCTTCCGTGCCGCCGCGCGCGAGCAGCTG
GCTGCCTGGGGCGAGCGTAACAACGTTACGGTCATCGCCCAGGACGGCGGCGATTCGGCGGCGGTCTGCTTCGACGCCAT
CAATGCCGCCCGTGCCCGTGGCATCGATATCGTCCTGGCCGACACCGCCGGCCGTCTGCCCACGCAATTGCACCTGATGG
ATGAAATCGCCAAGGTCAAACGGGTTATCGCCAAGGCAGACCCGACCGGCCCGCACGAAATCCTGCTGGTACTGGACGCC
AACACCGGCCAGAACGCGTTGCAGCAGGTCAAGGCGTTCGACGACGCCCTGGGCCTGACCGGCCTGGTATTGACCAAGCT
GGACGGCACGGCCAAGGGCGGCGTGATCGCCGGCATCGCCAAGCAAAAGGCCATCCCACTACGCTTTATCGGCGTGGGCG
AAGGCATAGACGACCTGCGTCCATTCGAAGCAGCCGACTATGTCGACGCGCTGATCGAATAG

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (194-392)

• SRP54-type protein, helical bundle domain (SRP54_N) (110-174)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	75.667	76.336	0.578