Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FO459_RS00805 | Genome accession | NZ_CP041727 |
| Coordinates | 148524..148925 (+) | Length | 133 a.a. |
| NCBI ID | WP_002461219.1 | Uniprot ID | A0A853V538 |
| Organism | Staphylococcus lugdunensis strain SL122 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 143524..153925
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FO459_RS00780 (FO459_00780) | - | 144808..145209 (+) | 402 | WP_002461226.1 | F0F1 ATP synthase subunit epsilon | - |
| FO459_RS00785 (FO459_00785) | - | 145347..145580 (+) | 234 | WP_002478965.1 | DUF1146 family protein | - |
| FO459_RS00790 (FO459_00790) | murA | 145744..147009 (+) | 1266 | WP_002461223.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| FO459_RS00795 (FO459_00795) | fabZ | 147046..147486 (+) | 441 | WP_002461222.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| FO459_RS00800 (FO459_00800) | - | 147883..148335 (-) | 453 | WP_002478966.1 | YwpF-like family protein | - |
| FO459_RS00805 (FO459_00805) | ssb | 148524..148925 (+) | 402 | WP_002461219.1 | single-stranded DNA-binding protein | Machinery gene |
| FO459_RS00810 (FO459_00810) | - | 149404..150111 (+) | 708 | WP_002478967.1 | transglycosylase family protein | - |
| FO459_RS00815 (FO459_00815) | tenA | 150524..151201 (+) | 678 | WP_002461217.1 | thiaminase II | - |
| FO459_RS00820 (FO459_00820) | thiD | 151206..152027 (+) | 822 | WP_002478968.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| FO459_RS00825 (FO459_00825) | thiM | 152020..152808 (+) | 789 | WP_002478969.1 | hydroxyethylthiazole kinase | - |
| FO459_RS00830 (FO459_00830) | thiE | 152811..153449 (+) | 639 | WP_002478970.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 133 a.a. Molecular weight: 15388.56 Da Isoelectric Point: 6.7151
>NTDB_id=373539 FO459_RS00805 WP_002461219.1 148524..148925(+) (ssb) [Staphylococcus lugdunensis strain SL122]
MLNKIVIVGRLTKDAQIYEKEEVKIATFCVATERNYKDDNNEQIVDYILCKAYGRTATNIEKYTSQGSLVGITGQMRSRK
YTKDQQTHFVTELYVETIKFMSSKGKTHEILEEHPTTNIQPFSVDEMKLLNIE
MLNKIVIVGRLTKDAQIYEKEEVKIATFCVATERNYKDDNNEQIVDYILCKAYGRTATNIEKYTSQGSLVGITGQMRSRK
YTKDQQTHFVTELYVETIKFMSSKGKTHEILEEHPTTNIQPFSVDEMKLLNIE
Nucleotide
Download Length: 402 bp
>NTDB_id=373539 FO459_RS00805 WP_002461219.1 148524..148925(+) (ssb) [Staphylococcus lugdunensis strain SL122]
ATGTTAAATAAAATCGTAATCGTTGGACGATTAACTAAAGATGCCCAAATATACGAGAAAGAGGAGGTTAAAATTGCTAC
ATTTTGTGTGGCTACGGAAAGAAATTATAAAGATGATAACAACGAGCAAATCGTAGATTATATTCTATGTAAAGCATATG
GTAGGACTGCTACCAACATTGAAAAGTATACCAGTCAGGGATCATTGGTTGGTATTACAGGTCAAATGCGCTCAAGAAAG
TATACTAAAGACCAACAAACACATTTTGTTACAGAATTATACGTAGAAACTATTAAATTCATGTCCTCTAAAGGCAAAAC
ACACGAAATCCTCGAAGAACATCCAACTACTAATATTCAACCTTTTTCAGTTGATGAAATGAAACTCTTAAATATCGAAT
AA
ATGTTAAATAAAATCGTAATCGTTGGACGATTAACTAAAGATGCCCAAATATACGAGAAAGAGGAGGTTAAAATTGCTAC
ATTTTGTGTGGCTACGGAAAGAAATTATAAAGATGATAACAACGAGCAAATCGTAGATTATATTCTATGTAAAGCATATG
GTAGGACTGCTACCAACATTGAAAAGTATACCAGTCAGGGATCATTGGTTGGTATTACAGGTCAAATGCGCTCAAGAAAG
TATACTAAAGACCAACAAACACATTTTGTTACAGAATTATACGTAGAAACTATTAAATTCATGTCCTCTAAAGGCAAAAC
ACACGAAATCCTCGAAGAACATCCAACTACTAATATTCAACCTTTTTCAGTTGATGAAATGAAACTCTTAAATATCGAAT
AA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
69.697 |
99.248 |
0.692 |
| ssb | Staphylococcus aureus MW2 |
68.939 |
99.248 |
0.684 |