Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FO456_RS05295 | Genome accession | NZ_CP041724 |
| Coordinates | 1144520..1144921 (+) | Length | 133 a.a. |
| NCBI ID | WP_002461219.1 | Uniprot ID | A0A853V538 |
| Organism | Staphylococcus lugdunensis strain SL55 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1139520..1149921
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FO456_RS05270 (FO456_05275) | - | 1140804..1141205 (+) | 402 | WP_002461226.1 | F0F1 ATP synthase subunit epsilon | - |
| FO456_RS05275 (FO456_05280) | - | 1141343..1141576 (+) | 234 | WP_002478965.1 | DUF1146 family protein | - |
| FO456_RS05280 (FO456_05285) | murA | 1141740..1143005 (+) | 1266 | WP_002461223.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| FO456_RS05285 (FO456_05290) | fabZ | 1143042..1143482 (+) | 441 | WP_002461222.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| FO456_RS05290 (FO456_05295) | - | 1143879..1144331 (-) | 453 | WP_002478966.1 | YwpF-like family protein | - |
| FO456_RS05295 (FO456_05300) | ssb | 1144520..1144921 (+) | 402 | WP_002461219.1 | single-stranded DNA-binding protein | Machinery gene |
| FO456_RS05300 (FO456_05305) | - | 1145400..1146107 (+) | 708 | WP_062077890.1 | transglycosylase family protein | - |
| FO456_RS05305 (FO456_05310) | tenA | 1146520..1147197 (+) | 678 | WP_070647980.1 | thiaminase II | - |
| FO456_RS05310 (FO456_05315) | thiD | 1147202..1148023 (+) | 822 | WP_002478968.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| FO456_RS05315 (FO456_05320) | thiM | 1148016..1148804 (+) | 789 | WP_070647979.1 | hydroxyethylthiazole kinase | - |
| FO456_RS05320 (FO456_05325) | thiE | 1148807..1149445 (+) | 639 | WP_002461213.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 133 a.a. Molecular weight: 15388.56 Da Isoelectric Point: 6.7151
>NTDB_id=373447 FO456_RS05295 WP_002461219.1 1144520..1144921(+) (ssb) [Staphylococcus lugdunensis strain SL55]
MLNKIVIVGRLTKDAQIYEKEEVKIATFCVATERNYKDDNNEQIVDYILCKAYGRTATNIEKYTSQGSLVGITGQMRSRK
YTKDQQTHFVTELYVETIKFMSSKGKTHEILEEHPTTNIQPFSVDEMKLLNIE
MLNKIVIVGRLTKDAQIYEKEEVKIATFCVATERNYKDDNNEQIVDYILCKAYGRTATNIEKYTSQGSLVGITGQMRSRK
YTKDQQTHFVTELYVETIKFMSSKGKTHEILEEHPTTNIQPFSVDEMKLLNIE
Nucleotide
Download Length: 402 bp
>NTDB_id=373447 FO456_RS05295 WP_002461219.1 1144520..1144921(+) (ssb) [Staphylococcus lugdunensis strain SL55]
ATGTTAAATAAAATCGTAATCGTTGGACGATTAACTAAAGATGCCCAAATATACGAGAAAGAGGAGGTTAAAATTGCTAC
ATTTTGTGTGGCTACGGAAAGAAATTATAAAGATGATAACAACGAGCAAATCGTAGATTATATTCTATGTAAAGCATATG
GTAGGACTGCTACCAACATTGAAAAGTATACCAGTCAGGGATCATTGGTTGGTATTACAGGTCAAATGCGCTCAAGAAAG
TATACTAAAGACCAACAAACACATTTTGTTACAGAATTATACGTAGAAACTATTAAATTCATGTCCTCTAAAGGCAAAAC
ACACGAAATCCTCGAAGAACATCCAACTACTAATATTCAACCTTTTTCAGTTGATGAAATGAAACTCTTAAATATCGAAT
AA
ATGTTAAATAAAATCGTAATCGTTGGACGATTAACTAAAGATGCCCAAATATACGAGAAAGAGGAGGTTAAAATTGCTAC
ATTTTGTGTGGCTACGGAAAGAAATTATAAAGATGATAACAACGAGCAAATCGTAGATTATATTCTATGTAAAGCATATG
GTAGGACTGCTACCAACATTGAAAAGTATACCAGTCAGGGATCATTGGTTGGTATTACAGGTCAAATGCGCTCAAGAAAG
TATACTAAAGACCAACAAACACATTTTGTTACAGAATTATACGTAGAAACTATTAAATTCATGTCCTCTAAAGGCAAAAC
ACACGAAATCCTCGAAGAACATCCAACTACTAATATTCAACCTTTTTCAGTTGATGAAATGAAACTCTTAAATATCGAAT
AA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
69.697 |
99.248 |
0.692 |
| ssb | Staphylococcus aureus MW2 |
68.939 |
99.248 |
0.684 |