Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   FO454_RS01955 Genome accession   NZ_CP041722
Coordinates   447243..448151 (-) Length   302 a.a.
NCBI ID   WP_002478513.1    Uniprot ID   -
Organism   Staphylococcus lugdunensis strain SL13     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 442243..453151
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FO454_RS01930 (FO454_01930) - 442478..443074 (-) 597 WP_012990693.1 DUF4064 domain-containing protein -
  FO454_RS01935 (FO454_01935) - 443347..443826 (-) 480 WP_002478517.1 DUF4064 domain-containing protein -
  FO454_RS01940 (FO454_01940) - 443913..444362 (-) 450 WP_002478516.1 DUF4064 domain-containing protein -
  FO454_RS01945 (FO454_01945) - 444404..446365 (-) 1962 WP_225307314.1 FtsX-like permease family protein -
  FO454_RS01950 (FO454_01950) - 446388..447137 (-) 750 WP_002478514.1 ABC transporter ATP-binding protein -
  FO454_RS01955 (FO454_01955) braS 447243..448151 (-) 909 WP_002478513.1 sensor histidine kinase Regulator
  FO454_RS01960 (FO454_01960) braR 448157..448822 (-) 666 WP_002460617.1 response regulator transcription factor Regulator
  FO454_RS13390 - 449038..449142 (-) 105 Protein_387 hypothetical protein -
  FO454_RS01970 (FO454_01970) - 449361..450809 (+) 1449 WP_002478511.1 alkaline phosphatase -
  FO454_RS01975 (FO454_01975) wecB 450995..452134 (-) 1140 WP_002478510.1 non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase -

Sequence

Protein


Download         Length: 302 a.a.        Molecular weight: 35307.95 Da        Isoelectric Point: 7.1983

>NTDB_id=373372 FO454_RS01955 WP_002478513.1 447243..448151(-) (braS) [Staphylococcus lugdunensis strain SL13]
MTMFFDTIKRELIITAMALVVFLVIFFVFNLPYYAYFLGSGIMLFIMVIYWFIALSEFKKQQRLTSQLKVLEQEVQQLKS
KQTQYQNDIESYFLTWVHQIKTPITASKLLLERNEDNVVNRVRQEIIQIDNYTSLALSYLKLMNHETDMSFTKVTVNELV
KPLIMKYSIQFIDQHTRIHYDRSDEEVLTDVQWASIMIEQILNNALKYARGKDIWLTFDKDINVLSIKDNGVGISTADLP
KIFDKGYSGYNGRLNEQSTGIGLFIVKHISNHIHHQVEVDSKLGQGTTFKIYFPKVDKMNEL

Nucleotide


Download         Length: 909 bp        

>NTDB_id=373372 FO454_RS01955 WP_002478513.1 447243..448151(-) (braS) [Staphylococcus lugdunensis strain SL13]
ATGACAATGTTCTTTGACACAATTAAGCGTGAACTGATCATCACCGCAATGGCATTAGTTGTTTTTTTAGTAATCTTTTT
TGTCTTTAATTTGCCCTACTATGCCTACTTTTTAGGAAGTGGCATTATGTTATTTATCATGGTTATTTATTGGTTTATCG
CATTGAGCGAGTTTAAAAAGCAACAACGATTGACATCTCAACTTAAAGTGTTAGAACAAGAAGTTCAACAATTAAAAAGC
AAGCAAACGCAATACCAAAATGACATCGAAAGCTATTTTCTTACTTGGGTACATCAAATTAAAACACCGATCACTGCCTC
CAAACTATTACTCGAACGTAATGAAGACAATGTTGTTAACCGTGTCCGACAAGAAATAATTCAAATTGATAATTACACTA
GTTTAGCTTTAAGCTATTTAAAATTAATGAATCATGAAACTGACATGAGCTTTACTAAAGTAACTGTCAATGAATTGGTT
AAGCCATTAATAATGAAATATTCAATACAATTTATCGATCAACATACACGTATACATTATGATCGCTCAGATGAAGAAGT
ATTGACAGATGTGCAATGGGCTTCCATTATGATAGAGCAAATTTTGAATAATGCACTAAAATATGCTCGTGGTAAAGATA
TTTGGTTAACTTTTGATAAAGATATAAACGTACTGTCTATCAAAGATAATGGTGTGGGTATTAGTACTGCTGATTTACCG
AAAATTTTTGATAAAGGTTATTCTGGTTATAATGGTCGTTTAAATGAGCAATCAACTGGTATTGGATTGTTTATAGTAAA
ACATATATCGAATCATATTCATCATCAAGTAGAAGTAGATTCTAAGCTAGGTCAAGGTACGACATTTAAGATTTATTTTC
CTAAGGTAGATAAAATGAATGAACTATAG

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(196-295)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

59.107

96.358

0.57

Multiple sequence alignment