Detailed information NTG0373218

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: FOG69_RS17330
• Genome accession: NZ_CP041693
• Coordinates: 3328390..3329553 (-)
• Length: 387 a.a.
• NCBI ID: WP_013353787.1
• Uniprot ID: A0A9P1JKJ4
• Organism: Bacillus amyloliquefaciens strain H
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3323390..3334553

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOG69_RS17300 (FOG69_17300)	-	3323656..3324075 (-)	420	WP_013353782.1	TIGR03826 family flagellar region protein	-
FOG69_RS17305 (FOG69_17305)	comFC	3324149..3324838 (-)	690	WP_198315882.1	ComF family protein	Machinery gene
FOG69_RS17310 (FOG69_17310)	-	3324844..3325128 (-)	285	WP_013353784.1	late competence development ComFB family protein	-
FOG69_RS17315 (FOG69_17315)	comFA	3325187..3326572 (-)	1386	WP_013353785.1	DEAD/DEAH box helicase	Machinery gene
FOG69_RS17320 (FOG69_17320)	-	3326679..3327527 (-)	849	WP_013353786.1	DegV family protein	-
FOG69_RS17325 (FOG69_17325)	degU	3327624..3328313 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
FOG69_RS17330 (FOG69_17330)	degS	3328390..3329553 (-)	1164	WP_013353787.1	two-component sensor histidine kinase DegS	Regulator
FOG69_RS17335 (FOG69_17335)	-	3329776..3330423 (+)	648	WP_013353788.1	YigZ family protein	-
FOG69_RS17340 (FOG69_17340)	-	3330428..3331702 (+)	1275	WP_013353789.1	LCP family protein	-
FOG69_RS17345 (FOG69_17345)	-	3331802..3332878 (-)	1077	WP_013353790.1	glycosyltransferase family 4 protein	-
FOG69_RS17350 (FOG69_17350)	-	3333011..3334207 (-)	1197	WP_014471096.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45028.85 Da
• Isoelectric Point: 7.1379

>NTDB_id=373218 FOG69_RS17330 WP_013353787.1 3328390..3329553(-) (degS) [Bacillus amyloliquefaciens strain H]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKEAKQKKNKSFGLLGMKERVDLLEGTITIDSKLGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=373218 FOG69_RS17330 WP_013353787.1 3328390..3329553(-) (degS) [Bacillus amyloliquefaciens strain H]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTCGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTCGAAGTACATACCCGGCATGCAAGAAACCGCTTGTCGGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTGCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATTATCGAAGCCCAGGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCGGCTCAAATGCTGGCAAATGTTATGATGAGATCGGAATTGATAGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGCTTTCAGGAAATCAGAAATCTTCGCCAGAATGTGCGGAATGCTCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCGCTGAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACTGCTGATTTTGTGGTTCTTATTATTAAGGACAACGGAAAAGGCTTTGATATCAAGGAAGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTCGAAGGAACGATAACGATAGACTCTAAACTAGGTCTTG
GGACATTTATCATGATTAAGGTTCCTTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948