Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   G6Z52_RS06910 Genome accession   NZ_CP049187
Coordinates   1404494..1405528 (-) Length   344 a.a.
NCBI ID   WP_002988663.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY1687     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1399494..1410528
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G6Z52_RS06870 (G6Z52_06915) - 1399821..1399976 (-) 156 WP_002988678.1 hypothetical protein -
  G6Z52_RS06875 (G6Z52_06920) - 1400302..1400652 (+) 351 WP_002988676.1 helix-turn-helix transcriptional regulator -
  G6Z52_RS06880 (G6Z52_06925) - 1400666..1401049 (+) 384 WP_002988673.1 ImmA/IrrE family metallo-endopeptidase -
  G6Z52_RS06885 (G6Z52_06930) - 1401060..1401611 (+) 552 WP_002988670.1 hypothetical protein -
  G6Z52_RS06890 (G6Z52_06935) - 1401728..1402806 (+) 1079 Protein_1303 tyrosine-type recombinase/integrase -
  G6Z52_RS06900 (G6Z52_06945) trmB 1403004..1403639 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  G6Z52_RS06905 (G6Z52_06950) - 1403639..1404430 (-) 792 WP_002983385.1 phosphotransferase family protein -
  G6Z52_RS06910 (G6Z52_06955) pptB 1404494..1405528 (-) 1035 WP_002988663.1 ABC transporter permease Regulator
  G6Z52_RS06915 (G6Z52_06960) pptA 1405531..1406256 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  G6Z52_RS06920 (G6Z52_06965) - 1406328..1406747 (+) 420 WP_002988659.1 HIT family protein -
  G6Z52_RS06925 (G6Z52_06970) - 1406744..1407100 (+) 357 WP_002988657.1 hypothetical protein -
  G6Z52_RS06930 (G6Z52_06975) - 1407211..1408491 (-) 1281 WP_212573202.1 LCP family protein -
  G6Z52_RS06935 (G6Z52_06980) - 1408500..1409024 (-) 525 WP_002988650.1 N-acetyltransferase -
  G6Z52_RS06940 (G6Z52_06985) tsaE 1408999..1409460 (-) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40241.47 Da        Isoelectric Point: 10.4168

>NTDB_id=372863 G6Z52_RS06910 WP_002988663.1 1404494..1405528(-) (pptB) [Streptococcus pyogenes strain TSPY1687]
MKALFLKRRQNFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNVLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=372863 G6Z52_RS06910 WP_002988663.1 1404494..1405528(-) (pptB) [Streptococcus pyogenes strain TSPY1687]
ATGAAAGCATTATTTCTGAAACGCCGTCAAAACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTCTAGGTTTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATTCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATGTGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(2-151)

Bacterial ABC transporter protein EcsB (EcsB)

(158-330)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43
  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427