Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | G5S31_RS09015 | Genome accession | NZ_CP049090 |
| Coordinates | 1840609..1840950 (+) | Length | 113 a.a. |
| NCBI ID | WP_021112680.1 | Uniprot ID | - |
| Organism | Glaesserella parasuis strain aHPS7 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1835609..1845950
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G5S31_RS08995 (G5S31_08965) | - | 1836884..1837471 (-) | 588 | WP_021111029.1 | FMN-dependent NADH-azoreductase | - |
| G5S31_RS09000 (G5S31_08970) | waaF | 1837567..1838619 (-) | 1053 | WP_160404687.1 | lipopolysaccharide heptosyltransferase II | - |
| G5S31_RS09005 (G5S31_08975) | - | 1838628..1838984 (-) | 357 | WP_234888240.1 | MliC family protein | - |
| G5S31_RS09010 (G5S31_08980) | - | 1839086..1840351 (-) | 1266 | WP_021112664.1 | LysM-like peptidoglycan-binding domain-containing protein | - |
| G5S31_RS09015 (G5S31_08985) | comEA/comE1 | 1840609..1840950 (+) | 342 | WP_021112680.1 | ComEA family DNA-binding protein | Machinery gene |
| G5S31_RS09025 (G5S31_08995) | epmA | 1841953..1842933 (+) | 981 | WP_035495957.1 | elongation factor P--(R)-beta-lysine ligase | - |
| G5S31_RS09030 (G5S31_09000) | - | 1842987..1843265 (+) | 279 | WP_005714674.1 | DUF1778 domain-containing protein | - |
| G5S31_RS09035 (G5S31_09005) | - | 1843266..1843763 (+) | 498 | WP_021112650.1 | GNAT family N-acetyltransferase | - |
| G5S31_RS09040 (G5S31_09010) | - | 1843777..1844559 (+) | 783 | WP_016527622.1 | TatD family hydrolase | - |
| G5S31_RS09045 (G5S31_09015) | - | 1844599..1845126 (+) | 528 | WP_010786291.1 | DUF1523 family protein | - |
Sequence
Protein
Download Length: 113 a.a. Molecular weight: 12447.29 Da Isoelectric Point: 9.8973
>NTDB_id=372356 G5S31_RS09015 WP_021112680.1 1840609..1840950(+) (comEA/comE1) [Glaesserella parasuis strain aHPS7]
MKKLSRYTFSLLFGLFSATTFAEEKVTTSTEHTPVVMQQVAATQKVNANVVNINTATASEIQDKLVGIGAKKAQAIVEYR
EKNGKFLNVEQLTEVSGIGKATLEKNRDRIVIE
MKKLSRYTFSLLFGLFSATTFAEEKVTTSTEHTPVVMQQVAATQKVNANVVNINTATASEIQDKLVGIGAKKAQAIVEYR
EKNGKFLNVEQLTEVSGIGKATLEKNRDRIVIE
Nucleotide
Download Length: 342 bp
>NTDB_id=372356 G5S31_RS09015 WP_021112680.1 1840609..1840950(+) (comEA/comE1) [Glaesserella parasuis strain aHPS7]
ATGAAAAAACTTTCTCGTTACACATTCAGTCTTTTATTTGGGCTTTTCTCTGCAACAACATTTGCTGAAGAAAAAGTAAC
TACGTCAACAGAACATACACCGGTAGTGATGCAACAAGTCGCAGCGACACAAAAAGTAAATGCGAATGTTGTAAATATCA
ATACTGCGACAGCCTCAGAAATCCAAGATAAGTTAGTCGGTATTGGAGCGAAAAAGGCTCAGGCAATTGTGGAATATCGT
GAGAAAAACGGTAAGTTTTTAAATGTTGAGCAGCTCACCGAAGTTTCAGGTATCGGGAAAGCGACACTTGAAAAAAACCG
AGATCGTATTGTGATTGAATAA
ATGAAAAAACTTTCTCGTTACACATTCAGTCTTTTATTTGGGCTTTTCTCTGCAACAACATTTGCTGAAGAAAAAGTAAC
TACGTCAACAGAACATACACCGGTAGTGATGCAACAAGTCGCAGCGACACAAAAAGTAAATGCGAATGTTGTAAATATCA
ATACTGCGACAGCCTCAGAAATCCAAGATAAGTTAGTCGGTATTGGAGCGAAAAAGGCTCAGGCAATTGTGGAATATCGT
GAGAAAAACGGTAAGTTTTTAAATGTTGAGCAGCTCACCGAAGTTTCAGGTATCGGGAAAGCGACACTTGAAAAAAACCG
AGATCGTATTGTGATTGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
99.115 |
100 |
0.991 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
59.13 |
100 |
0.602 |