Detailed information NTG0371890

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: FNL90_RS05425
• Genome accession: NZ_CP041408
• Coordinates: 1047138..1048367 (-)
• Length: 409 a.a.
• NCBI ID: WP_032464958.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain 37-97S
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1042138..1053367

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FNL90_RS05405 (FNL90_05585)	rpiA	1042420..1043103 (-)	684	WP_020905094.1	ribose-5-phosphate isomerase RpiA	-
FNL90_RS05410 (FNL90_05590)	-	1043481..1045580 (+)	2100	WP_030127660.1	AAA family ATPase	-
FNL90_RS05415 (FNL90_05595)	-	1045638..1046381 (-)	744	WP_002984942.1	hypothetical protein	-
FNL90_RS05420 (FNL90_05600)	yihA	1046529..1047128 (-)	600	WP_002984945.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
FNL90_RS05425 (FNL90_05605)	clpX	1047138..1048367 (-)	1230	WP_032464958.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
FNL90_RS05430 (FNL90_05610)	-	1048497..1048667 (-)	171	WP_002990165.1	hypothetical protein	-
FNL90_RS05435 (FNL90_05615)	-	1048687..1049184 (-)	498	WP_002984955.1	dihydrofolate reductase	-
FNL90_RS05440 (FNL90_05620)	-	1049264..1050103 (-)	840	WP_047235334.1	thymidylate synthase	-
FNL90_RS05445 (FNL90_05625)	-	1050312..1051487 (+)	1176	WP_021299369.1	hydroxymethylglutaryl-CoA synthase	-
FNL90_RS05450 (FNL90_05630)	-	1051474..1052751 (+)	1278	WP_047235335.1	hydroxymethylglutaryl-CoA reductase, degradative	-

Sequence

Protein

• Length: 409 a.a.
• Molecular weight: 45033.57 Da
• Isoelectric Point: 4.6616

>NTDB_id=371890 FNL90_RS05425 WP_032464958.1 1047138..1048367(-) (clpX) [Streptococcus pyogenes strain 37-97S]
MAGSRTNDIKVYCSFCGKSQDDVKKIIAGNNVFICNECVALSQEIIKEELAEEVLADLTEVPKPKELLDVLNQYVVGQDR
AKRALSVAVYNHYKRVSFTESRDDDDVDLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATSLTEAGYVGEDVENI
LLKLIQAADYNVERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIQIDTK
NILFIVGGAFDGIEEIVKQRLGEKVIGFGQNSRKIDDNASYMQEIISEDIQKFGLIPEFIGRLPVVAALEQLKTSDLIRI
LTEPRNALVKQYQALLSYDGVELAFDKEALEAIANKAIERKTGARGLRSIIEETMLDIMFEIPSQEDVTKVRITKAAVEG
KSKPVLETA

Nucleotide

• Length: 1230 bp

>NTDB_id=371890 FNL90_RS05425 WP_032464958.1 1047138..1048367(-) (clpX) [Streptococcus pyogenes strain 37-97S]
ATGGCAGGAAGTAGAACTAACGATATTAAAGTATACTGTTCATTTTGTGGTAAAAGCCAGGATGACGTTAAAAAAATTAT
CGCAGGAAATAATGTTTTCATCTGCAATGAATGCGTAGCTTTATCACAAGAAATTATAAAAGAAGAATTGGCTGAAGAAG
TCCTTGCCGATTTGACAGAAGTTCCAAAACCAAAAGAGCTCCTTGATGTTTTAAATCAATATGTGGTTGGTCAAGATCGT
GCTAAACGTGCTTTATCAGTTGCTGTGTACAATCATTATAAGCGTGTCTCGTTTACAGAAAGTCGTGATGACGATGATGT
GGATTTACAAAAGTCCAACATTTTGATGATTGGACCAACAGGTTCAGGAAAAACCTTCTTAGCACAAACTCTGGCTAAAA
GCCTCAATGTACCATTTGCTATTGCAGATGCAACTTCTTTGACTGAAGCAGGGTATGTTGGAGAAGATGTGGAAAATATT
TTACTCAAACTGATTCAGGCTGCTGACTATAATGTCGAACGAGCAGAGCGTGGTATTATTTATGTTGATGAAATAGATAA
GATTGCTAAAAAAGGTGAGAACGTATCTATCACACGTGATGTATCTGGTGAAGGTGTACAGCAAGCCCTTCTTAAAATTA
TTGAAGGTACGGTAGCAAGTGTTCCCCCACAAGGTGGGCGGAAGCACCCTAATCAAGAAATGATCCAAATTGATACAAAA
AATATCTTGTTTATTGTTGGCGGGGCTTTTGATGGCATCGAGGAGATTGTTAAACAACGTTTAGGTGAAAAAGTTATTGG
TTTTGGTCAAAACAGCCGTAAAATTGATGACAATGCTTCTTATATGCAAGAAATTATTTCAGAAGATATTCAAAAGTTTG
GGCTTATTCCAGAATTTATTGGTCGTTTACCAGTTGTGGCAGCTCTTGAACAACTTAAAACATCAGATTTGATTCGAATC
TTAACAGAACCAAGAAATGCCCTGGTCAAGCAATATCAGGCCCTTCTTTCTTACGATGGCGTCGAATTGGCATTTGATAA
GGAAGCCTTAGAAGCCATTGCCAATAAAGCCATTGAACGTAAGACAGGAGCACGTGGTCTTCGTTCTATTATTGAAGAAA
CGATGTTAGACATTATGTTTGAAATTCCAAGCCAAGAAGATGTCACAAAAGTGCGTATCACCAAGGCTGCTGTCGAAGGC
AAGTCAAAACCCGTTTTAGAGACAGCTTAA

Domains

Predicted by InterproScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (312-391)

• AAA domain (Cdc48 subfamily) (AAA_2) (110-305)

• ClpX C4-type zinc finger (zf-C4_ClpX) (12-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	88.998	100	0.89
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.603	98.044	0.575