Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   LPA_RS13745 Genome accession   NC_014125
Coordinates   3104577..3105236 (-) Length   219 a.a.
NCBI ID   WP_011947563.1    Uniprot ID   -
Organism   Legionella pneumophila 2300/99 Alcoy     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3099577..3110236
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LPA_RS13730 (lpa_03869) - 3100476..3101135 (+) 660 WP_013101910.1 hypothetical protein -
  LPA_RS13735 (lpa_03870) lcl 3101303..3102685 (+) 1383 WP_013101911.1 collagen-like adhesin Lcl -
  LPA_RS13740 (lpa_03873) uvrC 3102709..3104565 (-) 1857 WP_041932065.1 excinuclease ABC subunit UvrC -
  LPA_RS13745 (lpa_03874) letA 3104577..3105236 (-) 660 WP_011947563.1 two-component system response regulator LetA Regulator
  LPA_RS13750 (lpa_03875) phhA 3105361..3106179 (-) 819 WP_013101913.1 phenylalanine 4-monooxygenase -
  LPA_RS13755 (lpa_03876) - 3106619..3107716 (+) 1098 WP_011947565.1 molybdopterin-binding protein -
  LPA_RS13760 (lpa_03877) cgtA 3107675..3108700 (-) 1026 WP_011947566.1 Obg family GTPase CgtA -
  LPA_RS13765 (lpa_03878) rpmA 3108915..3109193 (-) 279 WP_010948350.1 50S ribosomal protein L27 -
  LPA_RS13770 (lpa_03879) rplU 3109206..3109517 (-) 312 WP_010948351.1 50S ribosomal protein L21 -

Sequence

Protein


Download         Length: 219 a.a.        Molecular weight: 24566.53 Da        Isoelectric Point: 5.1572

>NTDB_id=37155 LPA_RS13745 WP_011947563.1 3104577..3105236(-) (letA) [Legionella pneumophila 2300/99 Alcoy]
MIKVLIVDDHALVRMGIRRLLEDMSDVDVVADAESGEQALAYVKTHSPDVVLLDMKMPGIDGWEVTRRLKKTNPNIKVIA
VTAICSDPLPTRVLQLGAMGYLTKESGAEEMAAAIRKVAKGEKYLSAEIAQKMAINSLQEPQDSPFDLLSEREMQVMLMI
TSGMNVQDIADRLFLSSKTINGYRYRMFEKLGIKNDVELTYLAMKHRIIEHPNDLSQDD

Nucleotide


Download         Length: 660 bp        

>NTDB_id=37155 LPA_RS13745 WP_011947563.1 3104577..3105236(-) (letA) [Legionella pneumophila 2300/99 Alcoy]
TTGATTAAAGTATTAATTGTTGATGACCATGCATTGGTTAGAATGGGCATTCGACGATTGCTTGAAGATATGTCGGATGT
TGATGTGGTTGCAGATGCTGAAAGTGGGGAGCAGGCTTTAGCTTATGTGAAAACCCACTCCCCTGATGTCGTATTATTAG
ACATGAAAATGCCTGGGATAGATGGGTGGGAAGTGACGCGTCGCTTAAAAAAAACAAACCCAAATATTAAAGTCATAGCC
GTTACAGCTATTTGCTCAGATCCTCTCCCTACTCGAGTATTGCAATTAGGTGCTATGGGATACCTTACTAAAGAATCAGG
GGCTGAAGAAATGGCTGCTGCAATTCGTAAAGTGGCTAAAGGTGAGAAATATCTTAGTGCCGAGATTGCACAAAAAATGG
CAATTAATAGTCTTCAGGAGCCTCAAGATTCCCCCTTTGATTTATTGTCTGAAAGAGAAATGCAAGTCATGTTGATGATT
ACGAGCGGCATGAATGTACAAGACATTGCTGATAGATTATTTTTAAGTAGTAAAACCATCAATGGTTATCGATATAGGAT
GTTTGAAAAATTGGGGATTAAAAATGATGTGGAGCTTACTTATTTGGCTATGAAGCACCGCATTATTGAACACCCCAATG
ATTTGTCACAAGATGATTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(148-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

100

100

1
  letA Legionella pneumophila strain ERS1305867

100

100

1

Multiple sequence alignment