Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ECTR2_RS03215 Genome accession   NC_017343
Coordinates   673623..674297 (+) Length   224 a.a.
NCBI ID   WP_001166508.1    Uniprot ID   -
Organism   Staphylococcus aureus subsp. aureus ECT-R     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 668623..679297
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ECTR2_RS03185 (ECTR2_605) - 668838..669905 (+) 1068 WP_000980137.1 membrane protein -
  ECTR2_RS03190 (ECTR2_606) - 670056..671099 (+) 1044 WP_001030772.1 alpha/beta hydrolase -
  ECTR2_RS03200 (ECTR2_607) - 671428..671856 (+) 429 WP_000198504.1 hypothetical protein -
  ECTR2_RS03205 (ECTR2_608) - 672065..672571 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  ECTR2_RS03210 (ECTR2_609) graX 672684..673607 (+) 924 WP_000802953.1 auxiliary protein GraX/ApsX -
  ECTR2_RS03215 (ECTR2_610) braR 673623..674297 (+) 675 WP_001166508.1 response regulator transcription factor GraR/ApsR Regulator
  ECTR2_RS03220 (ECTR2_611) graS 674290..675330 (+) 1041 WP_001061264.1 histidine kinase GraS/ApsS -
  ECTR2_RS03225 (ECTR2_612) vraF 675474..676235 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  ECTR2_RS03230 (ECTR2_613) vraG 676225..678114 (+) 1890 WP_000143614.1 ABC transporter permease VraG -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 25993.81 Da        Isoelectric Point: 4.3915

>NTDB_id=37155 ECTR2_RS03215 WP_001166508.1 673623..674297(+) (braR) [Staphylococcus aureus subsp. aureus ECT-R]
MQILLVEDDNTLFQELKKELGQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=37155 ECTR2_RS03215 WP_001166508.1 673623..674297(+) (braR) [Staphylococcus aureus subsp. aureus ECT-R]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGGACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCTTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATTAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(149-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397

Multiple sequence alignment