Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   FKL89_RS19245 Genome accession   NZ_CP041352
Coordinates   4251446..4251871 (-) Length   141 a.a.
NCBI ID   WP_272953710.1    Uniprot ID   -
Organism   Casimicrobium huifangae strain SJ-1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4246446..4256871
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FKL89_RS19230 - 4248268..4250463 (-) 2196 WP_156864329.1 methyl-accepting chemotaxis protein -
  FKL89_RS19235 - 4250485..4251000 (-) 516 WP_156864330.1 chemotaxis protein CheW -
  FKL89_RS19240 - 4251065..4251433 (-) 369 WP_156864331.1 response regulator -
  FKL89_RS19245 pilG 4251446..4251871 (-) 426 WP_272953710.1 response regulator Regulator
  FKL89_RS19250 ilvA 4252043..4253575 (-) 1533 WP_156864332.1 threonine ammonia-lyase, biosynthetic -
  FKL89_RS19255 dnaQ 4253908..4254615 (-) 708 WP_156864333.1 DNA polymerase III subunit epsilon -
  FKL89_RS19260 - 4254602..4255531 (-) 930 WP_156864334.1 PP2C family protein-serine/threonine phosphatase -
  FKL89_RS19265 - 4255592..4256551 (-) 960 WP_156864335.1 serine/threonine protein kinase -

Sequence

Protein


Download         Length: 141 a.a.        Molecular weight: 15438.86 Da        Isoelectric Point: 7.1355

>NTDB_id=371412 FKL89_RS19245 WP_272953710.1 4251446..4251871(-) (pilG) [Casimicrobium huifangae strain SJ-1]
MHMQATGANAEPSEVDGLKVMVIDDSNTIRRSAEIFLLQAGCQVILAEDGFDALAKIADHRPDVIFVDIMMPRLDGYLTC
ALIKKNAKFKSTPVVMLSSKDGLFDRARGRMVGSDQYLTKPFTKESLISAVASFAGRERAN

Nucleotide


Download         Length: 426 bp        

>NTDB_id=371412 FKL89_RS19245 WP_272953710.1 4251446..4251871(-) (pilG) [Casimicrobium huifangae strain SJ-1]
ATGCACATGCAGGCGACAGGCGCTAACGCGGAACCGTCCGAAGTGGACGGACTCAAGGTAATGGTCATTGACGACAGCAA
CACCATTCGTCGCAGCGCCGAGATCTTCCTGTTGCAGGCGGGATGTCAGGTTATTCTTGCCGAGGATGGTTTCGATGCGC
TGGCAAAAATCGCCGACCATCGACCTGATGTCATCTTCGTCGATATCATGATGCCGCGCCTTGATGGCTATCTGACATGT
GCGCTGATCAAGAAGAACGCGAAATTCAAATCCACCCCGGTGGTCATGCTCTCTTCAAAAGACGGGCTTTTTGATCGCGC
AAGAGGGCGTATGGTCGGCTCCGATCAGTACCTGACCAAGCCTTTTACCAAGGAGAGCCTCATTTCGGCGGTGGCGTCTT
TCGCGGGCCGCGAACGAGCCAATTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(20-131)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

66.957

81.56

0.546

Multiple sequence alignment