Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | FI644_RS17180 | Genome accession | NZ_CP041305 |
| Coordinates | 3437766..3438836 (+) | Length | 356 a.a. |
| NCBI ID | WP_053476999.1 | Uniprot ID | - |
| Organism | Cytobacillus solani strain 5L6 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3432766..3443836
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FI644_RS17150 | - | 3432832..3433146 (+) | 315 | WP_053477004.1 | MTH1187 family thiamine-binding protein | - |
| FI644_RS17155 | - | 3433548..3433721 (-) | 174 | WP_075209188.1 | DUF2759 domain-containing protein | - |
| FI644_RS17160 | - | 3434008..3434643 (+) | 636 | WP_142108654.1 | MBL fold metallo-hydrolase | - |
| FI644_RS17165 | - | 3435306..3436367 (+) | 1062 | WP_142108655.1 | class I SAM-dependent methyltransferase | - |
| FI644_RS17170 | - | 3436429..3436671 (-) | 243 | WP_053477001.1 | DUF2626 domain-containing protein | - |
| FI644_RS17175 | - | 3436763..3437464 (-) | 702 | WP_142108656.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| FI644_RS17180 | comGA | 3437766..3438836 (+) | 1071 | WP_053476999.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| FI644_RS17185 | comGB | 3438823..3439854 (+) | 1032 | WP_053476998.1 | competence type IV pilus assembly protein ComGB | - |
| FI644_RS17190 | comGC | 3439854..3440189 (+) | 336 | WP_142108657.1 | competence type IV pilus major pilin ComGC | - |
| FI644_RS17195 | comGD | 3440182..3440622 (+) | 441 | WP_142108658.1 | competence type IV pilus minor pilin ComGD | - |
| FI644_RS17200 | - | 3440606..3440938 (+) | 333 | WP_053476995.1 | hypothetical protein | - |
| FI644_RS17205 | comGF | 3440892..3441374 (+) | 483 | WP_246066963.1 | competence type IV pilus minor pilin ComGF | - |
| FI644_RS17210 | comGG | 3441361..3441744 (+) | 384 | WP_053476993.1 | competence type IV pilus minor pilin ComGG | - |
| FI644_RS17215 | - | 3441759..3442262 (+) | 504 | WP_053476992.1 | shikimate kinase | - |
| FI644_RS17220 | - | 3442330..3442506 (+) | 177 | WP_075209182.1 | YqzE family protein | - |
| FI644_RS17225 | - | 3442544..3443356 (-) | 813 | WP_053476991.1 | YqhG family protein | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 40211.60 Da Isoelectric Point: 8.8741
>NTDB_id=371170 FI644_RS17180 WP_053476999.1 3437766..3438836(+) (comGA) [Cytobacillus solani strain 5L6]
MNTIEKLAERIIKDAVRNHASDIHIVPRRSDTLIQLRLANKLIPRLYLPKEECDRLISHFKFTASMDIGEKRRPQSGANS
YQIDGQMIGFRFSTLPSSHNESLVIRILPQQEQIPFYQISLFPSMTRKLLALLKHAHGLIIFTGPTGSGKTTTLYSLLNE
TSHMFNRNVITLEDPIEKENDMVLQVQVNEKAGVSYATGLKAILRHDPDIIMVGEIRDAETAKIAVRAALTGHLVLSTMH
TRDARGAIYRLSEFGVDAVEIEQTLVAVTAQRLVELSCPFCKGECSPYCYCYGRLKRASIFELLTGRALNASMKVARGEE
AVIKYRNLKDIIKKGIALGFIKETEYERWVLEHDQT
MNTIEKLAERIIKDAVRNHASDIHIVPRRSDTLIQLRLANKLIPRLYLPKEECDRLISHFKFTASMDIGEKRRPQSGANS
YQIDGQMIGFRFSTLPSSHNESLVIRILPQQEQIPFYQISLFPSMTRKLLALLKHAHGLIIFTGPTGSGKTTTLYSLLNE
TSHMFNRNVITLEDPIEKENDMVLQVQVNEKAGVSYATGLKAILRHDPDIIMVGEIRDAETAKIAVRAALTGHLVLSTMH
TRDARGAIYRLSEFGVDAVEIEQTLVAVTAQRLVELSCPFCKGECSPYCYCYGRLKRASIFELLTGRALNASMKVARGEE
AVIKYRNLKDIIKKGIALGFIKETEYERWVLEHDQT
Nucleotide
Download Length: 1071 bp
>NTDB_id=371170 FI644_RS17180 WP_053476999.1 3437766..3438836(+) (comGA) [Cytobacillus solani strain 5L6]
TTGAATACAATTGAAAAGCTTGCAGAAAGAATTATTAAAGATGCTGTCAGAAATCATGCATCAGATATCCACATTGTTCC
CCGCAGAAGCGATACCCTCATCCAATTACGTCTTGCTAACAAACTAATTCCCAGACTCTATTTGCCGAAAGAAGAATGCG
ACAGACTGATTTCACACTTTAAATTTACGGCTTCAATGGATATCGGTGAAAAGAGAAGACCGCAAAGCGGTGCAAACTCC
TATCAAATTGATGGTCAAATGATCGGCTTTCGCTTTTCAACGCTCCCCTCTAGTCATAATGAAAGCCTAGTTATTCGAAT
CCTCCCTCAGCAAGAACAAATTCCTTTCTACCAAATTTCTTTATTCCCGAGTATGACCCGAAAACTACTTGCCTTATTAA
AGCATGCCCACGGATTAATCATATTTACTGGTCCGACTGGATCAGGTAAAACTACCACCCTATACTCGCTTCTCAATGAA
ACCTCACATATGTTCAATCGCAATGTCATCACCCTTGAAGACCCAATTGAAAAAGAAAATGATATGGTGCTCCAGGTTCA
AGTGAATGAAAAAGCTGGTGTGTCCTATGCAACTGGATTAAAAGCCATTCTAAGACATGATCCAGATATCATTATGGTGG
GGGAAATCAGAGATGCAGAAACGGCAAAGATAGCAGTAAGAGCTGCACTAACAGGTCATTTAGTTCTTTCAACGATGCAT
ACGAGGGATGCTAGAGGAGCGATTTACAGGTTGAGTGAATTTGGTGTGGATGCAGTAGAAATAGAACAGACCCTTGTTGC
TGTAACCGCGCAGAGACTTGTGGAATTATCCTGTCCGTTTTGTAAGGGGGAATGTTCCCCATACTGCTATTGCTATGGCA
GATTGAAAAGAGCAAGTATTTTTGAGCTTTTAACTGGGAGGGCATTAAATGCCTCTATGAAAGTGGCGAGAGGTGAAGAG
GCTGTTATTAAATACCGAAACTTAAAGGATATCATTAAAAAGGGAATAGCACTTGGTTTTATTAAAGAAACAGAATATGA
GCGGTGGGTGCTTGAGCATGATCAAACGTAA
TTGAATACAATTGAAAAGCTTGCAGAAAGAATTATTAAAGATGCTGTCAGAAATCATGCATCAGATATCCACATTGTTCC
CCGCAGAAGCGATACCCTCATCCAATTACGTCTTGCTAACAAACTAATTCCCAGACTCTATTTGCCGAAAGAAGAATGCG
ACAGACTGATTTCACACTTTAAATTTACGGCTTCAATGGATATCGGTGAAAAGAGAAGACCGCAAAGCGGTGCAAACTCC
TATCAAATTGATGGTCAAATGATCGGCTTTCGCTTTTCAACGCTCCCCTCTAGTCATAATGAAAGCCTAGTTATTCGAAT
CCTCCCTCAGCAAGAACAAATTCCTTTCTACCAAATTTCTTTATTCCCGAGTATGACCCGAAAACTACTTGCCTTATTAA
AGCATGCCCACGGATTAATCATATTTACTGGTCCGACTGGATCAGGTAAAACTACCACCCTATACTCGCTTCTCAATGAA
ACCTCACATATGTTCAATCGCAATGTCATCACCCTTGAAGACCCAATTGAAAAAGAAAATGATATGGTGCTCCAGGTTCA
AGTGAATGAAAAAGCTGGTGTGTCCTATGCAACTGGATTAAAAGCCATTCTAAGACATGATCCAGATATCATTATGGTGG
GGGAAATCAGAGATGCAGAAACGGCAAAGATAGCAGTAAGAGCTGCACTAACAGGTCATTTAGTTCTTTCAACGATGCAT
ACGAGGGATGCTAGAGGAGCGATTTACAGGTTGAGTGAATTTGGTGTGGATGCAGTAGAAATAGAACAGACCCTTGTTGC
TGTAACCGCGCAGAGACTTGTGGAATTATCCTGTCCGTTTTGTAAGGGGGAATGTTCCCCATACTGCTATTGCTATGGCA
GATTGAAAAGAGCAAGTATTTTTGAGCTTTTAACTGGGAGGGCATTAAATGCCTCTATGAAAGTGGCGAGAGGTGAAGAG
GCTGTTATTAAATACCGAAACTTAAAGGATATCATTAAAAAGGGAATAGCACTTGGTTTTATTAAAGAAACAGAATATGA
GCGGTGGGTGCTTGAGCATGATCAAACGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
55.84 |
98.596 |
0.551 |
| pilB | Glaesserella parasuis strain SC1401 |
39.773 |
98.876 |
0.393 |
| pilB | Haemophilus influenzae 86-028NP |
37.069 |
97.753 |
0.362 |