Detailed information NTG0371010

Bioinformatically predicted

Overview

• Name: comE
• Type: Machinery gene
• Locus tag: FK537_RS09470
• Genome accession: NZ_CP041291
• Coordinates: 1889951..1890403 (+)
• Length: 150 a.a.
• NCBI ID: WP_168369960.1
• Uniprot ID: -
• Organism: Acinetobacter indicus strain 94-2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1884951..1895403

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FK537_RS09460 (FK537_09530)	-	1885514..1886281 (+)	768	WP_168369958.1	pilus assembly PilX N-terminal domain-containing protein	-
FK537_RS09465 (FK537_09535)	-	1886297..1889941 (+)	3645	WP_168369959.1	pilus assembly protein	-
FK537_RS09470 (FK537_09540)	comE	1889951..1890403 (+)	453	WP_168369960.1	type IV pilin protein	Machinery gene
FK537_RS09475 (FK537_09545)	-	1890397..1890852 (+)	456	WP_168369961.1	type IV pilin protein	-
FK537_RS09480 (FK537_09550)	rpsP	1890995..1891252 (+)	258	WP_004809941.1	30S ribosomal protein S16	-
FK537_RS09485 (FK537_09555)	rimM	1891281..1891829 (+)	549	WP_168369962.1	ribosome maturation factor RimM	-
FK537_RS09490 (FK537_09560)	trmD	1891856..1892605 (+)	750	WP_168369963.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
FK537_RS09495 (FK537_09565)	rplS	1892778..1893152 (+)	375	WP_003792460.1	50S ribosomal protein L19	-
FK537_RS15655 (FK537_09570)	-	1893216..1893775 (-)	560	Protein_1773	esterase/lipase family protein	-
FK537_RS09505 (FK537_09575)	-	1893865..1894839 (-)	975	WP_168369964.1	esterase/lipase family protein	-

Sequence

Protein

• Length: 150 a.a.
• Molecular weight: 16383.50 Da
• Isoelectric Point: 9.0903

>NTDB_id=371010 FK537_RS09470 WP_168369960.1 1889951..1890403(+) (comE) [Acinetobacter indicus strain 94-2]
MNNALSIQKGFTLIELMVVVVIVAIIAAIAIPSYQEYVRRANAAQAQQEVQRLASELERWKSRNFNYLGFNLTPNAVQNY
TFVVRDGAAGNPALTATAASGTSWVIRAVHNDGRNFSFLMSSNGIRCKNKTSSNVTFTDCGTDTTGSEAW

Nucleotide

• Length: 453 bp

>NTDB_id=371010 FK537_RS09470 WP_168369960.1 1889951..1890403(+) (comE) [Acinetobacter indicus strain 94-2]
ATGAATAATGCATTATCTATTCAGAAAGGTTTTACCTTAATTGAGCTGATGGTTGTGGTGGTGATTGTTGCAATTATTGC
AGCAATCGCTATTCCAAGCTATCAGGAATATGTGCGTAGAGCAAATGCTGCACAAGCACAGCAAGAGGTGCAGCGCTTAG
CAAGTGAACTTGAACGTTGGAAATCACGTAATTTTAATTATTTAGGCTTTAATCTTACTCCTAATGCTGTTCAAAACTAC
ACTTTTGTGGTTCGAGATGGTGCTGCCGGAAATCCAGCTCTTACAGCAACAGCAGCAAGCGGGACGAGTTGGGTGATACG
TGCTGTGCACAATGATGGTCGAAACTTTAGCTTCTTAATGAGTAGTAATGGAATTCGTTGTAAAAATAAAACCAGCAGCA
ATGTGACATTCACAGATTGTGGGACGGATACAACAGGGAGTGAGGCATGGTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (7-30)

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (32-112)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comE	Acinetobacter baylyi ADP1	48.214	100	0.54
pilY2	Acinetobacter baumannii D1279779	48.052	100	0.493