Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   C8250_RS24505 Genome accession   NZ_CP048835
Coordinates   5429153..5430277 (-) Length   374 a.a.
NCBI ID   WP_138354131.1    Uniprot ID   A0ABW8CIC5
Organism   Streptomyces sp. So13.3     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5424153..5435277
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C8250_RS24480 (C8250_024495) cseB 5425108..5425791 (-) 684 WP_138354127.1 two-component system response regulator CseB -
  C8250_RS24485 (C8250_024500) - 5425784..5426392 (-) 609 WP_244809340.1 hypothetical protein -
  C8250_RS24490 (C8250_024505) - 5426380..5426910 (-) 531 WP_138354128.1 SigE family RNA polymerase sigma factor -
  C8250_RS24495 (C8250_024510) - 5427089..5427985 (-) 897 WP_138354129.1 A/G-specific adenine glycosylase -
  C8250_RS24500 (C8250_024515) - 5428117..5428938 (+) 822 WP_138354130.1 hypothetical protein -
  C8250_RS24505 (C8250_024520) disA 5429153..5430277 (-) 1125 WP_138354131.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  C8250_RS24510 (C8250_024525) radA/sms 5430379..5431764 (-) 1386 WP_138354132.1 DNA repair protein RadA Machinery gene
  C8250_RS24515 (C8250_024530) - 5431957..5433588 (+) 1632 WP_138354133.1 sigma-70 family RNA polymerase sigma factor -
  C8250_RS24520 (C8250_024535) - 5433787..5434596 (-) 810 WP_138354156.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40394.22 Da        Isoelectric Point: 5.0092

>NTDB_id=370915 C8250_RS24505 WP_138354131.1 5429153..5430277(-) (disA) [Streptomyces sp. So13.3]
MAANDRAAAPGKSGGSSAADALMRASLSAVAPGTGLRDGLERILRGNTGGLLVLGMDKTVESLCTGGFVLDVEFTATRLR
ELCKLDGALILDKDLTKILRAGVQLVPDSNIPTEETGTRHRTADRVSKQVNFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVSQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRNRTVPEALVELDALPHAELLELTTVARALGYTGSPETLDSAVSPRGYRLLAKVPRLPNT
VIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=370915 C8250_RS24505 WP_138354131.1 5429153..5430277(-) (disA) [Streptomyces sp. So13.3]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGCAAGTCCGGCGGGAGTTCCGCTGCTGATGCCCTGATGCGCGCCTCGCT
CAGCGCGGTCGCTCCCGGCACCGGCCTGCGTGACGGACTCGAACGCATTCTGCGGGGCAATACGGGCGGTCTGCTCGTCC
TCGGCATGGACAAGACCGTCGAGTCGCTCTGTACCGGCGGCTTCGTCCTCGACGTCGAATTCACCGCGACCCGGCTCCGC
GAACTGTGCAAGCTCGACGGCGCGCTGATCCTCGACAAGGACCTCACGAAGATTCTGCGGGCCGGTGTGCAGTTGGTCCC
CGACTCCAACATCCCGACCGAGGAGACCGGCACCCGGCACCGCACGGCGGACCGGGTGAGCAAGCAGGTCAACTTCCCGG
TCGTCTCGGTCAGCCAGTCGATGCGGCTGATCGCGCTGTACGTCGACGGGCAGCGCCGGGTCCTGGAGGACTCCGCCGCG
ATCCTGTCGCGGGCGAACCAGGCGCTGGCCACTCTGGAGCGCTACAAGCTGCGCCTGGACGAGGTGGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTCACCGTCCGGGACGTCAGCGCGGTCTCGCAGCGGCTGGAGATGGTCCGCCGGATCG
CCACCGAGATCGCCGAGTACGTGGTCGAGCTGGGCACCGACGGCCGGCTGCTCTCCCTGCAGCTGGACGAGCTGATCGCG
GGCGTCGAGCCGGAGCGCGAGCTGGTCGTCAGGGACTACGTGCCGGAGCCGACCGCGAAGCGGAACAGGACCGTGCCGGA
GGCGCTCGTCGAACTGGACGCGCTGCCGCACGCCGAGCTCCTCGAACTGACCACCGTGGCCCGTGCCCTGGGCTACACCG
GCTCCCCCGAGACGCTGGACTCCGCGGTCTCGCCGCGCGGCTACCGGCTGCTGGCGAAGGTGCCGCGGCTGCCGAACACG
GTCATCGAGCGGCTGGTCGAGCACTTCGGCGGCCTGCAGAAGCTGCTCGCTGCGAGCGTCGACGACCTGCAGACGGTGGA
CGGGGTCGGCGAGGCGCGGGCGCGTTCGGTGCGGGAGGGCCTGTCCAGGCTGGCGGAGTCGTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.028

96.791

0.436