Detailed information    

insolico Bioinformatically predicted

Overview


Name   tsaP   Type   Machinery gene
Locus tag   AhaeAN54_RS17300 Genome accession   NZ_CP041224
Coordinates   3536595..3537746 (+) Length   383 a.a.
NCBI ID   WP_005092484.1    Uniprot ID   A0A372MNT8
Organism   Acinetobacter haemolyticus strain AN54     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 3531595..3542746
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AhaeAN54_RS17275 (AhaeAN54_017275) istB 3531662..3532399 (+) 738 WP_118903281.1 IS21-like element helper ATPase IstB -
  AhaeAN54_RS17280 (AhaeAN54_017280) - 3532535..3533266 (+) 732 Protein_3354 hypothetical protein -
  AhaeAN54_RS17285 (AhaeAN54_017285) - 3533311..3535407 (-) 2097 WP_115736206.1 TonB-dependent copper receptor -
  AhaeAN54_RS17290 (AhaeAN54_017290) - 3535481..3535918 (-) 438 WP_004637503.1 DUF2946 family protein -
  AhaeAN54_RS17295 (AhaeAN54_017295) def 3535939..3536469 (-) 531 WP_004637502.1 peptide deformylase -
  AhaeAN54_RS17300 (AhaeAN54_017300) tsaP 3536595..3537746 (+) 1152 WP_005092484.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  AhaeAN54_RS17305 (AhaeAN54_017305) dprA 3537758..3538888 (+) 1131 WP_115736207.1 DNA-processing protein DprA Machinery gene
  AhaeAN54_RS17310 (AhaeAN54_017310) - 3538926..3539495 (+) 570 WP_005085670.1 Sua5/YciO/YrdC/YwlC family protein -
  AhaeAN54_RS17315 (AhaeAN54_017315) - 3539871..3540791 (-) 921 WP_005085672.1 DMT family transporter -
  AhaeAN54_RS17320 (AhaeAN54_017320) - 3540894..3541541 (-) 648 WP_017396658.1 TetR/AcrR family transcriptional regulator -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 41721.84 Da        Isoelectric Point: 9.4255

>NTDB_id=370697 AhaeAN54_RS17300 WP_005092484.1 3536595..3537746(+) (tsaP) [Acinetobacter haemolyticus strain AN54]
MKKVLNGIQSFHALGLKKQLIAAAICAGLGMSVNLAHAASPNVSPPSVKVGAPHVYVVKKGDTLWDISGKFLSKPWRWPE
IWASNKHVKNPHWIYPGDRLLLCSLNGKPLVGKDEGDGCAGIIRRYTGNTSTLRPQVRVEALNNSIPVIPLAHIQQWLER
TSVLPADAIAHTPYILGTADQRVLAGKGQRVYVRGNGIENGQRYGVFREGEPYTILDEHGKKQVLGVELTQVASGVAIST
EKDITTVELTDSYNGEVRRGDRVMPEQDAMLPTLFYPTDANQVTDGGKIIRVMGSIGTAAKNGVVTVDRGTADGIEIGQV
FNAYQDGETVKDPKTKENVKLPGQYVGSVMIFKSFDRISYAYVLESELPIKMGSSIKPPRLDN

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=370697 AhaeAN54_RS17300 WP_005092484.1 3536595..3537746(+) (tsaP) [Acinetobacter haemolyticus strain AN54]
ATGAAAAAGGTTTTAAACGGCATACAATCATTTCATGCCTTGGGGTTAAAAAAACAACTGATTGCCGCTGCAATATGTGC
AGGACTAGGCATGAGTGTCAATCTTGCACATGCTGCAAGTCCGAACGTTAGTCCACCCTCAGTAAAAGTGGGTGCACCAC
ACGTTTATGTGGTCAAAAAAGGCGATACGCTTTGGGACATTTCAGGTAAGTTTTTAAGCAAGCCTTGGCGTTGGCCTGAG
ATTTGGGCAAGCAATAAGCACGTTAAAAACCCACATTGGATCTATCCAGGCGATCGCTTATTGCTTTGTAGTTTGAATGG
CAAACCATTGGTGGGTAAAGATGAGGGAGATGGCTGTGCGGGTATTATTCGCCGTTATACAGGCAACACCTCAACATTAC
GCCCACAGGTGCGTGTCGAAGCACTCAACAATAGCATTCCAGTTATTCCATTGGCGCACATTCAACAATGGCTCGAGCGT
ACCTCGGTTCTTCCAGCTGATGCAATTGCGCATACACCTTATATCCTGGGTACAGCCGATCAACGTGTACTCGCTGGTAA
AGGTCAACGTGTTTATGTTCGCGGTAACGGTATTGAAAATGGTCAACGCTATGGCGTATTCCGTGAAGGTGAACCGTACA
CCATTCTTGATGAACATGGCAAAAAGCAGGTCCTTGGCGTTGAATTGACCCAAGTTGCTTCAGGTGTTGCTATTAGCACT
GAAAAGGATATTACCACTGTTGAGTTAACCGATAGTTATAACGGTGAAGTTCGTCGTGGTGATCGTGTCATGCCTGAACA
AGATGCCATGTTACCAACATTGTTCTACCCAACCGATGCAAATCAAGTCACTGATGGCGGTAAAATCATTCGTGTCATGG
GTTCAATTGGTACAGCCGCTAAAAATGGTGTTGTCACCGTTGATCGTGGTACAGCTGATGGAATCGAAATCGGACAAGTA
TTTAATGCTTATCAAGACGGTGAAACAGTTAAAGATCCGAAAACGAAAGAAAATGTCAAATTACCAGGACAGTATGTCGG
TAGTGTGATGATCTTTAAGAGCTTTGACCGTATCAGCTATGCGTATGTGCTTGAAAGTGAGTTACCAATAAAAATGGGCT
CAAGTATCAAACCACCTCGTTTAGATAACTAA

Domains


Predicted by InterproScan.

(56-101)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A372MNT8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

72.135

100

0.723


Multiple sequence alignment