Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   AhaeAN54_RS17305 Genome accession   NZ_CP041224
Coordinates   3537758..3538888 (+) Length   376 a.a.
NCBI ID   WP_115736207.1    Uniprot ID   -
Organism   Acinetobacter haemolyticus strain AN54     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 3532758..3543888
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AhaeAN54_RS17285 (AhaeAN54_017285) - 3533311..3535407 (-) 2097 WP_115736206.1 TonB-dependent copper receptor -
  AhaeAN54_RS17290 (AhaeAN54_017290) - 3535481..3535918 (-) 438 WP_004637503.1 DUF2946 family protein -
  AhaeAN54_RS17295 (AhaeAN54_017295) def 3535939..3536469 (-) 531 WP_004637502.1 peptide deformylase -
  AhaeAN54_RS17300 (AhaeAN54_017300) tsaP 3536595..3537746 (+) 1152 WP_005092484.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  AhaeAN54_RS17305 (AhaeAN54_017305) dprA 3537758..3538888 (+) 1131 WP_115736207.1 DNA-processing protein DprA Machinery gene
  AhaeAN54_RS17310 (AhaeAN54_017310) - 3538926..3539495 (+) 570 WP_005085670.1 Sua5/YciO/YrdC/YwlC family protein -
  AhaeAN54_RS17315 (AhaeAN54_017315) - 3539871..3540791 (-) 921 WP_005085672.1 DMT family transporter -
  AhaeAN54_RS17320 (AhaeAN54_017320) - 3540894..3541541 (-) 648 WP_017396658.1 TetR/AcrR family transcriptional regulator -
  AhaeAN54_RS17325 (AhaeAN54_017325) - 3541688..3542911 (+) 1224 WP_115736208.1 MFS transporter -
  AhaeAN54_RS17330 (AhaeAN54_017330) - 3542923..3543696 (+) 774 WP_113997862.1 helix-turn-helix transcriptional regulator -

Sequence


Protein


Download         Length: 376 a.a.        Molecular weight: 41903.55 Da        Isoelectric Point: 6.6482

>NTDB_id=370698 AhaeAN54_RS17305 WP_115736207.1 3537758..3538888(+) (dprA) [Acinetobacter haemolyticus strain AN54]
MLNQLLPHHYSTVLVWYLVQHSLSSFQKIIDYFGDCEQATQTERFSEWQQLGLHANHLKRLAEFQTPEGQQQFAQLVKLI
CQHSDFILTPQDIGYPTQLLPYSDHPPILFGQGNPHALLQPQIAMVGSRKPSPHGRQVAYDFAYYLSEKGFYISSGLAHG
IDHAAHQGGLVHQRTIAVVGTGLDRVYPTQHVQLAQQIAQSGAIISEFLPSTMPLQQHFPRRNRIVSGLSLGVVVVEAAI
KSGSLITANQAASQGKMVFAIPGHIYSEHHQGCHQLIREGAILVDHPEQVIEDLALPTQWQSEQQSSEKSSNAAPSLPSH
LVGLYQCLDWVGQDIDQLTQQQQSNIAELTSHLMELELLGLCTQQGGRYLRCRPML

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=370698 AhaeAN54_RS17305 WP_115736207.1 3537758..3538888(+) (dprA) [Acinetobacter haemolyticus strain AN54]
ATGTTGAACCAATTATTACCTCACCATTACTCTACCGTGCTGGTGTGGTATTTGGTTCAACATTCACTTTCTAGCTTTCA
AAAAATTATCGACTATTTTGGTGATTGCGAACAGGCCACCCAAACTGAGCGTTTTTCTGAGTGGCAACAACTGGGCTTAC
ATGCCAATCATTTAAAACGTTTAGCTGAATTTCAAACACCTGAAGGGCAACAACAATTTGCTCAGTTAGTAAAATTAATC
TGTCAACATAGTGATTTTATTTTAACACCCCAAGATATTGGCTATCCAACACAACTGCTCCCTTACTCAGACCATCCACC
GATACTTTTTGGACAAGGGAATCCACACGCTTTATTACAACCACAAATCGCGATGGTAGGAAGCCGCAAACCGAGTCCTC
ATGGGCGCCAAGTCGCTTATGATTTTGCGTATTATTTAAGTGAAAAAGGTTTTTATATTAGTAGTGGTCTAGCCCATGGT
ATTGATCATGCTGCACATCAAGGTGGATTGGTTCATCAACGTACCATTGCTGTTGTTGGAACAGGATTAGACCGTGTCTA
TCCAACTCAACATGTACAACTAGCCCAGCAAATTGCACAGTCGGGTGCTATCATCTCCGAGTTCCTTCCCTCCACTATGC
CTTTACAACAACATTTCCCTCGTCGTAATCGGATTGTCAGTGGCTTAAGTCTTGGTGTGGTTGTGGTTGAAGCTGCAATA
AAAAGTGGTTCTCTTATTACTGCCAATCAGGCGGCTAGCCAAGGAAAAATGGTGTTTGCGATTCCTGGGCATATTTATAG
TGAACATCATCAAGGCTGTCACCAACTCATTCGAGAAGGTGCAATCTTAGTCGATCATCCTGAGCAAGTAATCGAGGACT
TAGCCTTGCCTACTCAATGGCAATCTGAACAGCAATCCTCAGAAAAGTCCTCAAATGCGGCTCCAAGCCTTCCCTCACAC
TTGGTTGGTCTATATCAATGTTTAGACTGGGTTGGACAAGACATAGACCAACTCACACAACAACAGCAAAGCAATATTGC
TGAGCTTACTTCACACCTCATGGAACTTGAGCTATTAGGTTTATGTACACAACAAGGCGGACGCTATTTACGTTGTCGTC
CAATGCTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

72.533

99.734

0.723

  dprA Acinetobacter baumannii D1279779

72.533

99.734

0.723

  dprA Acinetobacter baylyi ADP1

68.504

100

0.694


Multiple sequence alignment