Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | BMD_RS21740 | Genome accession | NC_014103 |
| Coordinates | 4330203..4331255 (-) | Length | 350 a.a. |
| NCBI ID | WP_013085018.1 | Uniprot ID | D5DMH8 |
| Organism | Priestia megaterium DSM 319 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 4325203..4336255
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BMD_RS21700 (BMD_4473) | - | 4326219..4327043 (+) | 825 | WP_013085011.1 | YqhG family protein | - |
| BMD_RS21705 (BMD_4474) | - | 4327067..4327252 (-) | 186 | WP_013059170.1 | YqzE family protein | - |
| BMD_RS21710 (BMD_4475) | comGG | 4327296..4327670 (-) | 375 | WP_042452721.1 | competence type IV pilus minor pilin ComGG | - |
| BMD_RS21715 (BMD_4476) | comGF | 4327660..4328097 (-) | 438 | WP_013085013.1 | competence type IV pilus minor pilin ComGF | - |
| BMD_RS21720 (BMD_4477) | - | 4328094..4328432 (-) | 339 | WP_013085014.1 | type II secretion system protein | - |
| BMD_RS21725 (BMD_4478) | comGD | 4328416..4328898 (-) | 483 | WP_218039677.1 | competence type IV pilus minor pilin ComGD | - |
| BMD_RS21730 (BMD_4479) | comGC | 4328840..4329151 (-) | 312 | WP_013085016.1 | competence type IV pilus major pilin ComGC | - |
| BMD_RS21735 (BMD_4480) | comGB | 4329166..4330212 (-) | 1047 | WP_013085017.1 | competence type IV pilus assembly protein ComGB | - |
| BMD_RS21740 (BMD_4481) | comGA | 4330203..4331255 (-) | 1053 | WP_013085018.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| BMD_RS21745 (BMD_4482) | - | 4331525..4331908 (-) | 384 | WP_013059178.1 | Spx/MgsR family RNA polymerase-binding regulatory protein | - |
| BMD_RS21750 (BMD_4483) | - | 4332171..4332407 (+) | 237 | WP_013059179.1 | DUF2626 domain-containing protein | - |
| BMD_RS21755 (BMD_4484) | - | 4332445..4333077 (-) | 633 | WP_013085020.1 | MBL fold metallo-hydrolase | - |
| BMD_RS26290 (BMD_4485) | - | 4333286..4333462 (+) | 177 | WP_013059181.1 | DUF2759 domain-containing protein | - |
| BMD_RS21765 (BMD_4486) | - | 4333498..4334400 (-) | 903 | WP_013085021.1 | M14 family metallocarboxypeptidase | - |
| BMD_RS21770 (BMD_4487) | - | 4334512..4335480 (-) | 969 | WP_013085022.1 | ROK family glucokinase | - |
| BMD_RS21775 (BMD_4488) | - | 4335483..4335689 (-) | 207 | WP_013059184.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 350 a.a. Molecular weight: 39671.03 Da Isoelectric Point: 9.1859
>NTDB_id=37049 BMD_RS21740 WP_013085018.1 4330203..4331255(-) (comGA) [Priestia megaterium DSM 319]
MTEIEQFATYVIRDAYECRSSDVHIVPRKKDAVIQLRIDQELILKRVISKEMSERLISHFKFLGGMDIGERRKPQNGALT
TSIDHYQVNLRLSTLPTSHDESLVIRLLPHQQSTSLKHLSLFPEHTKKLISLLKFSHGLIIFTGPTGSGKTTTLYTLLHE
VKHLFNRNVITLEDPIEKPSETVLQVQVNERAGITYTTGLKAILRHDPDIIMVGEIRDSETAKIAVRAALTGHLVLTTMH
TKDTKGSLYRLLEFGVSFQEMEQTLVAVAAQRLVEIRCPLCSGKCHPACKKMRKHRQSSIYELLYGKELSAVMREVKGEN
ADYDYKTLRDVILKGIALGYLYPHSLDGWG
MTEIEQFATYVIRDAYECRSSDVHIVPRKKDAVIQLRIDQELILKRVISKEMSERLISHFKFLGGMDIGERRKPQNGALT
TSIDHYQVNLRLSTLPTSHDESLVIRLLPHQQSTSLKHLSLFPEHTKKLISLLKFSHGLIIFTGPTGSGKTTTLYTLLHE
VKHLFNRNVITLEDPIEKPSETVLQVQVNERAGITYTTGLKAILRHDPDIIMVGEIRDSETAKIAVRAALTGHLVLTTMH
TKDTKGSLYRLLEFGVSFQEMEQTLVAVAAQRLVEIRCPLCSGKCHPACKKMRKHRQSSIYELLYGKELSAVMREVKGEN
ADYDYKTLRDVILKGIALGYLYPHSLDGWG
Nucleotide
Download Length: 1053 bp
>NTDB_id=37049 BMD_RS21740 WP_013085018.1 4330203..4331255(-) (comGA) [Priestia megaterium DSM 319]
TTGACCGAAATTGAACAGTTTGCTACTTACGTTATACGAGATGCATATGAGTGCCGAAGTTCTGATGTGCATATTGTGCC
CCGAAAGAAAGATGCTGTGATTCAGCTGCGAATTGACCAAGAGCTTATTTTAAAGAGGGTTATTTCAAAGGAAATGTCTG
AACGGCTCATTTCGCATTTTAAATTTTTAGGGGGAATGGATATTGGCGAGCGCAGAAAACCTCAAAATGGTGCATTGACC
ACTTCCATTGATCACTATCAAGTAAATTTGCGTTTATCAACTCTTCCTACTTCTCATGATGAAAGTCTTGTTATTCGGCT
TTTGCCTCATCAACAATCTACATCTCTCAAACATTTATCTCTTTTTCCTGAACATACTAAAAAGCTTATTTCTCTCTTGA
AATTCTCTCATGGATTAATTATTTTTACCGGTCCTACAGGATCAGGTAAAACCACTACTCTATATACTCTTTTACACGAA
GTAAAGCACCTTTTTAATCGAAATGTTATTACATTAGAAGATCCTATTGAAAAACCGAGCGAAACCGTCCTTCAAGTACA
GGTAAATGAACGGGCAGGGATTACGTACACGACTGGTTTAAAAGCTATATTGCGCCATGACCCAGACATTATCATGGTGG
GAGAAATAAGAGATAGTGAGACTGCCAAAATTGCTGTGAGAGCAGCGCTTACCGGACACTTGGTTTTGACAACGATGCAT
ACTAAAGATACAAAAGGATCTTTGTACAGGCTGCTTGAATTTGGCGTTAGCTTTCAAGAAATGGAACAGACCCTTGTAGC
AGTAGCTGCACAGCGCCTTGTAGAAATTCGCTGTCCGCTGTGTTCCGGAAAATGCCACCCCGCTTGTAAAAAAATGAGAA
AACATCGTCAGTCCAGCATATACGAATTGCTTTATGGCAAGGAGCTTAGCGCAGTGATGAGAGAAGTGAAAGGAGAAAAT
GCGGATTATGATTATAAGACGCTCCGAGATGTTATTCTAAAAGGAATCGCGCTAGGCTATTTATATCCGCATTCACTAGA
CGGATGGGGGTAA
TTGACCGAAATTGAACAGTTTGCTACTTACGTTATACGAGATGCATATGAGTGCCGAAGTTCTGATGTGCATATTGTGCC
CCGAAAGAAAGATGCTGTGATTCAGCTGCGAATTGACCAAGAGCTTATTTTAAAGAGGGTTATTTCAAAGGAAATGTCTG
AACGGCTCATTTCGCATTTTAAATTTTTAGGGGGAATGGATATTGGCGAGCGCAGAAAACCTCAAAATGGTGCATTGACC
ACTTCCATTGATCACTATCAAGTAAATTTGCGTTTATCAACTCTTCCTACTTCTCATGATGAAAGTCTTGTTATTCGGCT
TTTGCCTCATCAACAATCTACATCTCTCAAACATTTATCTCTTTTTCCTGAACATACTAAAAAGCTTATTTCTCTCTTGA
AATTCTCTCATGGATTAATTATTTTTACCGGTCCTACAGGATCAGGTAAAACCACTACTCTATATACTCTTTTACACGAA
GTAAAGCACCTTTTTAATCGAAATGTTATTACATTAGAAGATCCTATTGAAAAACCGAGCGAAACCGTCCTTCAAGTACA
GGTAAATGAACGGGCAGGGATTACGTACACGACTGGTTTAAAAGCTATATTGCGCCATGACCCAGACATTATCATGGTGG
GAGAAATAAGAGATAGTGAGACTGCCAAAATTGCTGTGAGAGCAGCGCTTACCGGACACTTGGTTTTGACAACGATGCAT
ACTAAAGATACAAAAGGATCTTTGTACAGGCTGCTTGAATTTGGCGTTAGCTTTCAAGAAATGGAACAGACCCTTGTAGC
AGTAGCTGCACAGCGCCTTGTAGAAATTCGCTGTCCGCTGTGTTCCGGAAAATGCCACCCCGCTTGTAAAAAAATGAGAA
AACATCGTCAGTCCAGCATATACGAATTGCTTTATGGCAAGGAGCTTAGCGCAGTGATGAGAGAAGTGAAAGGAGAAAAT
GCGGATTATGATTATAAGACGCTCCGAGATGTTATTCTAAAAGGAATCGCGCTAGGCTATTTATATCCGCATTCACTAGA
CGGATGGGGGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
58.857 |
100 |
0.589 |