Detailed information NTG0370397

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: BvL003_RS16965
• Genome accession: NZ_CP041192
• Coordinates: 3456586..3457749 (-)
• Length: 387 a.a.
• NCBI ID: WP_015387626.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain BvL03
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3451586..3462749

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BvL003_RS16935 (BvL003_17160)	-	3451851..3452270 (-)	420	WP_146275632.1	TIGR03826 family flagellar region protein	-
BvL003_RS16940 (BvL003_17165)	comFC	3452344..3453033 (-)	690	WP_202980098.1	phosphoribosyltransferase family protein	Machinery gene
BvL003_RS16945 (BvL003_17170)	-	3453039..3453323 (-)	285	WP_017418816.1	late competence development ComFB family protein	-
BvL003_RS16950 (BvL003_17175)	comFA	3453381..3454766 (-)	1386	WP_146275634.1	DEAD/DEAH box helicase	Machinery gene
BvL003_RS16955 (BvL003_17180)	-	3454874..3455722 (-)	849	WP_003151387.1	DegV family protein	-
BvL003_RS16960 (BvL003_17185)	degU	3455820..3456509 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
BvL003_RS16965 (BvL003_17190)	degS	3456586..3457749 (-)	1164	WP_015387626.1	two-component sensor histidine kinase DegS	Regulator
BvL003_RS16970 (BvL003_17195)	-	3457972..3458619 (+)	648	WP_060657503.1	YigZ family protein	-
BvL003_RS16975 (BvL003_17200)	-	3458624..3459799 (+)	1176	WP_146275636.1	LCP family protein	-
BvL003_RS16980 (BvL003_17205)	-	3459889..3460965 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
BvL003_RS16985 (BvL003_17210)	tuaH	3461098..3462294 (-)	1197	WP_070082461.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 44971.80 Da
• Isoelectric Point: 6.8616

>NTDB_id=370397 BvL003_RS16965 WP_015387626.1 3456586..3457749(-) (degS) [Bacillus velezensis strain BvL03]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLLERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=370397 BvL003_RS16965 WP_015387626.1 3456586..3457749(-) (degS) [Bacillus velezensis strain BvL03]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCTGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATCGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.065	99.483	0.946