Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   NIBR502773_RS13365 Genome accession   NZ_CP041189
Coordinates   2879682..2880089 (-) Length   135 a.a.
NCBI ID   WP_027606081.1    Uniprot ID   A0A7Z1K349
Organism   Pseudomonas sp. NIBRBAC000502773     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2874682..2885089
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NIBR502773_RS13350 (NIBR502773_13350) - 2876685..2878736 (-) 2052 WP_027606079.1 methyl-accepting chemotaxis protein -
  NIBR502773_RS13355 (NIBR502773_13355) - 2878733..2879257 (-) 525 WP_141156221.1 chemotaxis protein CheW -
  NIBR502773_RS13360 (NIBR502773_13360) pilH 2879270..2879635 (-) 366 WP_014720320.1 twitching motility response regulator PilH -
  NIBR502773_RS13365 (NIBR502773_13365) pilG 2879682..2880089 (-) 408 WP_027606081.1 twitching motility response regulator PilG Regulator
  NIBR502773_RS13370 (NIBR502773_13370) gshB 2880330..2881283 (+) 954 WP_141156222.1 glutathione synthase -
  NIBR502773_RS13375 (NIBR502773_13375) - 2881361..2882266 (+) 906 WP_027606083.1 energy transducer TonB -
  NIBR502773_RS13380 (NIBR502773_13380) - 2882355..2882924 (+) 570 WP_027606084.1 YqgE/AlgH family protein -
  NIBR502773_RS13385 (NIBR502773_13385) ruvX 2882924..2883361 (+) 438 WP_005792259.1 Holliday junction resolvase RuvX -
  NIBR502773_RS13390 (NIBR502773_13390) pyrR 2883445..2883951 (+) 507 WP_141156223.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  NIBR502773_RS13395 (NIBR502773_13395) - 2883976..2884980 (+) 1005 WP_027606086.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14964.48 Da        Isoelectric Point: 7.3842

>NTDB_id=370307 NIBR502773_RS13365 WP_027606081.1 2879682..2880089(-) (pilG) [Pseudomonas sp. NIBRBAC000502773]
MEQHSNALRVMVIDDSKTIRRTAETLLKNVGCDVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPVFK
SIPVIMLSSKDGLFDKAKGRIVGVDQFLTKPFSKEELLSAIKAYVPGFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=370307 NIBR502773_RS13365 WP_027606081.1 2879682..2880089(-) (pilG) [Pseudomonas sp. NIBRBAC000502773]
ATGGAACAGCATTCCAACGCCTTGAGAGTGATGGTGATCGACGACTCGAAGACGATCCGCCGCACCGCCGAGACGCTGTT
GAAGAACGTGGGCTGCGATGTCATCACGGCCATCGACGGTTTCGATGCCCTGGCCCGGATTGTGGATCATCACCCGCACA
TTATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGGTGAAGAACAACCCGGTGTTCAAG
TCGATCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTGGGTGTCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAGCTGCTGAGTGCGATCAAGGCCTATGTGCCCGGGTTCGCCGCAGTGGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7Z1K349

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70.4

92.593

0.652
  vicR Streptococcus mutans UA159

38.889

93.333

0.363

Multiple sequence alignment