Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   FIM06_RS11745 Genome accession   NZ_CP041144
Coordinates   2417902..2418702 (-) Length   266 a.a.
NCBI ID   WP_003153177.1    Uniprot ID   I2C7K5
Organism   Bacillus velezensis strain UCMB5044     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2412902..2423702
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FIM06_RS11720 (FIM06_2180) - 2413440..2414072 (+) 633 WP_045208456.1 helix-turn-helix domain-containing protein -
  FIM06_RS20200 (FIM06_2181) - 2414370..2414507 (+) 138 WP_162918042.1 hypothetical protein -
  FIM06_RS11725 (FIM06_2182) - 2414601..2415719 (+) 1119 WP_105938231.1 NADH-dependent flavin oxidoreductase -
  FIM06_RS11730 (FIM06_2183) - 2415846..2416058 (+) 213 WP_234017442.1 spore germination protein -
  FIM06_RS11735 (FIM06_2184) - 2416184..2416396 (+) 213 WP_007612499.1 spore germination protein -
  FIM06_RS11740 (FIM06_2185) alr 2416573..2417754 (+) 1182 WP_025649856.1 alanine racemase -
  FIM06_RS11745 (FIM06_2186) spo0A 2417902..2418702 (-) 801 WP_003153177.1 sporulation transcription factor Spo0A Regulator
  FIM06_RS11750 (FIM06_2187) spoIVB 2418983..2420263 (-) 1281 WP_007408360.1 SpoIVB peptidase -
  FIM06_RS11755 (FIM06_2188) recN 2420427..2422157 (-) 1731 WP_032874060.1 DNA repair protein RecN Machinery gene
  FIM06_RS11760 (FIM06_2189) ahrC 2422189..2422638 (-) 450 WP_003153173.1 transcriptional regulator AhrC/ArgR -
  FIM06_RS11765 (FIM06_2190) - 2422735..2423580 (-) 846 WP_007612503.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29630.11 Da        Isoelectric Point: 6.1630

>NTDB_id=369748 FIM06_RS11745 WP_003153177.1 2417902..2418702(-) (spo0A) [Bacillus velezensis strain UCMB5044]
MEKIKVCVADDNRELVSLLSEYIEGQDDMEVIGVAYNGQECLSLFKDKNPDVLVLDIIMPHLDGLAVLERLRESELEKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNVSSVTHRAPSAQSSIIRSQPEPKRKNLDASITSII
HEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVS
MTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 801 bp        

>NTDB_id=369748 FIM06_RS11745 WP_003153177.1 2417902..2418702(-) (spo0A) [Bacillus velezensis strain UCMB5044]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTTGTAAGCCTGTTGAGTGAATATATAGAGGGACAGGA
TGATATGGAAGTGATCGGCGTTGCTTATAACGGACAGGAATGTCTTTCTTTGTTTAAAGATAAGAATCCCGATGTGCTCG
TTTTAGACATTATCATGCCGCATCTGGACGGACTTGCGGTTTTGGAGCGTCTGCGGGAATCAGAGCTCGAGAAGCAGCCG
AACGTCATCATGCTGACGGCATTCGGTCAGGAAGACGTAACGAAAAAAGCCGTCGATTTAGGCGCGTCCTATTTTATCCT
GAAGCCGTTTGATATGGAAAACCTTGTCGGCCATATCCGCCAGGTAAGCGGAAATGTCAGCAGTGTCACACACCGTGCGC
CGTCTGCGCAAAGCAGCATTATCCGCAGCCAGCCGGAGCCGAAGCGGAAAAATCTCGATGCCAGCATTACAAGCATTATC
CATGAGATCGGTGTGCCTGCCCATATCAAAGGCTATCTTTATTTGCGTGAAGCCATTTCCATGGTGTATAACGATATTGA
ACTCCTCGGCAGCATCACAAAAGTCCTTTATCCCGACATCGCCAAAAAATTCAACACGACCGCAAGCCGTGTAGAACGGG
CCATCCGCCACGCCATTGAAGTCGCATGGAGCAGGGGAAATATTGATTCCATTTCTTCACTGTTCGGATATACGGTAAGC
ATGACAAAAGCAAAACCAACCAATTCAGAATTCATCGCGATGGTTGCTGACAAGCTGAGATTGGAGCATAAAGCTTCGTA
A

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(156-259)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C7K5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

96.629

100

0.97

Multiple sequence alignment