Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | FJM75_RS13955 | Genome accession | NZ_CP041063 |
| Coordinates | 2782799..2785240 (+) | Length | 813 a.a. |
| NCBI ID | WP_165999132.1 | Uniprot ID | - |
| Organism | Bacillus sp. Cs-700 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2777799..2790240
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FJM75_RS13940 | - | 2780679..2781140 (+) | 462 | WP_159780801.1 | CtsR family transcriptional regulator | - |
| FJM75_RS13945 | - | 2781169..2781705 (+) | 537 | WP_165999128.1 | UvrB/UvrC motif-containing protein | - |
| FJM75_RS13950 | - | 2781705..2782802 (+) | 1098 | WP_165999130.1 | protein arginine kinase | - |
| FJM75_RS13955 | clpC | 2782799..2785240 (+) | 2442 | WP_165999132.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| FJM75_RS13960 | radA | 2785495..2786868 (+) | 1374 | WP_165999134.1 | DNA repair protein RadA | Machinery gene |
| FJM75_RS13965 | disA | 2786872..2787933 (+) | 1062 | WP_165999136.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| FJM75_RS13970 | - | 2788094..2789191 (+) | 1098 | WP_165999138.1 | PIN/TRAM domain-containing protein | - |
| FJM75_RS13975 | ispD | 2789217..2789909 (+) | 693 | WP_165999140.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
Sequence
Protein
Download Length: 813 a.a. Molecular weight: 90684.13 Da Isoelectric Point: 6.0567
>NTDB_id=369254 FJM75_RS13955 WP_165999132.1 2782799..2785240(+) (clpC) [Bacillus sp. Cs-700]
MMFGRFTERAQKVLALAQEEAIRLGHNNVGTEHILLGLIREGEGIAAKALTALGLGSEKIQKEVEKLIGRGQDSVQSIHY
TPRAKKVIELSMDEARKLSHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESSSSSHQGGGASAN
TPTLDSLARDLTVIARDNGLDPVIGRSKEIERVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVNEPTSDESALILKGLRDRYEAHHRVTITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAA
SKVRLRSYTAPPNLKELDKKLEEVRKEKDAAVQSQEFEKAASLRDSEQRLREQLEQTKKEWKEKQGKENQEVTPEDIAIV
VANWTGIPVSKLEEQETERLLKMEEILHNRLIGQEEAVKSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARAVA
ETLFGEEDSVIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRVVDFRNTVVIMTSNVGASTLKRNKYVGFSTGSEGQEYSDMKGKVMDDLKKTFRPEFLNRIDETIVFHSLEKKHL
KEIIVLMANQLKARLSDHGIDFELTDSALDKISEEGYDPEYGARPLRRALQRHIEDRLSEELLKGNIEKGQRVKIDYKEN
DFVVETLSEATSS
MMFGRFTERAQKVLALAQEEAIRLGHNNVGTEHILLGLIREGEGIAAKALTALGLGSEKIQKEVEKLIGRGQDSVQSIHY
TPRAKKVIELSMDEARKLSHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESSSSSHQGGGASAN
TPTLDSLARDLTVIARDNGLDPVIGRSKEIERVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVNEPTSDESALILKGLRDRYEAHHRVTITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAA
SKVRLRSYTAPPNLKELDKKLEEVRKEKDAAVQSQEFEKAASLRDSEQRLREQLEQTKKEWKEKQGKENQEVTPEDIAIV
VANWTGIPVSKLEEQETERLLKMEEILHNRLIGQEEAVKSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARAVA
ETLFGEEDSVIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRVVDFRNTVVIMTSNVGASTLKRNKYVGFSTGSEGQEYSDMKGKVMDDLKKTFRPEFLNRIDETIVFHSLEKKHL
KEIIVLMANQLKARLSDHGIDFELTDSALDKISEEGYDPEYGARPLRRALQRHIEDRLSEELLKGNIEKGQRVKIDYKEN
DFVVETLSEATSS
Nucleotide
Download Length: 2442 bp
>NTDB_id=369254 FJM75_RS13955 WP_165999132.1 2782799..2785240(+) (clpC) [Bacillus sp. Cs-700]
ATGATGTTTGGACGATTTACAGAACGTGCCCAGAAAGTACTTGCATTAGCACAAGAAGAGGCCATCCGACTTGGTCATAA
TAACGTTGGAACTGAACATATCCTACTCGGCTTGATTCGCGAAGGGGAAGGCATTGCCGCTAAAGCTTTAACAGCTCTTG
GGCTGGGCTCAGAAAAAATTCAAAAAGAAGTAGAGAAGTTGATTGGGCGTGGACAGGATTCTGTTCAATCTATTCACTAT
ACACCAAGAGCTAAGAAAGTTATCGAGCTATCAATGGATGAAGCACGTAAGTTAAGCCACTCCTATGTTGGAACGGAGCA
TATCTTACTTGGTCTTATTCGTGAAGGAGAAGGCGTTGCTGCTCGTGTTCTTAACAACCTTGGTGTTAGCTTGAATAAAG
CACGTCAACAGGTTCTTCAATTGCTTGGAAGCAATGAAAGTTCTTCTTCTAGTCATCAGGGTGGTGGAGCAAGTGCCAAT
ACGCCAACGCTTGATAGCCTAGCAAGAGACCTTACTGTCATAGCACGAGACAATGGTTTAGACCCCGTTATTGGCAGAAG
CAAAGAAATTGAGCGAGTGATTGAAGTTCTTAGCCGACGGACGAAAAACAATCCGGTTCTTATTGGTGAGCCCGGTGTAG
GTAAGACAGCAATCGCTGAGGGCCTTGCGCAGCAAATTATTAATAATGAAGTACCTGAGACTCTCCGTGATAAGCGTGTG
ATGACGCTTGATATGGGTACTGTAGTAGCCGGAACGAAATACCGTGGTGAATTCGAAGATCGTTTAAAGAAAGTAATGGA
TGAAATTCGTCAGGCAGGCAATATCATTTTATTCATTGATGAACTTCATACGCTTATTGGAGCTGGTGGGGCAGAAGGTG
CAATTGATGCATCGAATATCCTCAAGCCGGCACTAGCAAGAGGGGAGCTTCAATGTATTGGTGCGACAACACTTGACGAG
TATCGTAAATATATTGAGAAGGATGCGGCACTGGAAAGACGTTTCCAACCAATACAGGTAAATGAACCGACAAGTGATGA
ATCGGCGCTTATCTTAAAAGGTCTGCGTGATCGTTATGAAGCGCATCACCGCGTTACAATTACAGATGATGCTATTGAAG
CCGCTGTTAAGCTTTCAGATCGATATATATCAGATCGTTTTCTACCAGATAAAGCGATTGACTTAATTGACGAAGCTGCT
TCGAAAGTTCGTCTACGTTCTTATACAGCACCACCGAATTTGAAAGAGCTTGATAAGAAGCTGGAAGAAGTTCGAAAAGA
AAAAGATGCTGCTGTTCAAAGTCAAGAATTTGAGAAAGCCGCTTCTCTTCGCGACTCTGAGCAACGCTTACGTGAGCAGC
TTGAGCAAACGAAGAAAGAATGGAAAGAAAAGCAAGGCAAAGAGAATCAAGAAGTTACACCAGAAGATATTGCGATTGTC
GTTGCCAATTGGACCGGAATCCCGGTCTCCAAACTAGAAGAGCAGGAAACAGAGCGACTGTTGAAGATGGAAGAGATTCT
TCATAATCGTCTGATTGGTCAAGAAGAAGCTGTTAAATCAATTTCAAAAGCAGTTCGACGTGCTCGTGCTGGTCTTAAGG
ATCCTAAACGCCCAATTGGTTCATTCATTTTCCTTGGACCAACTGGTGTTGGTAAGACCGAACTCGCTCGTGCAGTTGCT
GAAACGCTATTTGGTGAAGAAGATTCTGTAATCCGTATTGATATGTCTGAGTACATGGAGAAACACTCAACGTCACGCCT
TGTTGGTTCACCTCCAGGATATGTTGGCTATGAAGAAGGCGGTCAGTTAACTGAGAAGGTAAGACGCAAACCTTATTCTG
TTATCTTGCTAGATGAGATTGAAAAAGCACACCCAGACGTGTTTAATATTCTATTACAAGTGCTAGAAGATGGACGATTG
ACTGATTCTAAAGGGCGTGTAGTTGATTTCCGTAATACAGTAGTCATTATGACGTCAAACGTTGGGGCTAGCACGCTTAA
GCGCAATAAATATGTTGGGTTCTCAACAGGATCTGAAGGTCAGGAATATAGTGATATGAAAGGTAAAGTGATGGATGATC
TCAAGAAGACTTTCCGTCCGGAGTTCTTGAACCGTATTGATGAGACGATCGTATTCCATTCCCTTGAAAAGAAACACTTG
AAAGAAATCATAGTCCTTATGGCCAACCAACTTAAGGCTCGTCTATCTGATCATGGGATTGATTTTGAACTAACTGATTC
TGCACTTGATAAAATTTCTGAAGAAGGCTATGATCCAGAATATGGTGCTCGACCGCTTAGAAGAGCTCTACAGCGTCATA
TTGAAGACCGTCTTTCTGAAGAATTGTTAAAAGGAAATATTGAAAAAGGTCAGCGAGTGAAGATTGATTACAAAGAGAAC
GATTTTGTTGTCGAAACGCTTTCTGAAGCAACTTCATCATAA
ATGATGTTTGGACGATTTACAGAACGTGCCCAGAAAGTACTTGCATTAGCACAAGAAGAGGCCATCCGACTTGGTCATAA
TAACGTTGGAACTGAACATATCCTACTCGGCTTGATTCGCGAAGGGGAAGGCATTGCCGCTAAAGCTTTAACAGCTCTTG
GGCTGGGCTCAGAAAAAATTCAAAAAGAAGTAGAGAAGTTGATTGGGCGTGGACAGGATTCTGTTCAATCTATTCACTAT
ACACCAAGAGCTAAGAAAGTTATCGAGCTATCAATGGATGAAGCACGTAAGTTAAGCCACTCCTATGTTGGAACGGAGCA
TATCTTACTTGGTCTTATTCGTGAAGGAGAAGGCGTTGCTGCTCGTGTTCTTAACAACCTTGGTGTTAGCTTGAATAAAG
CACGTCAACAGGTTCTTCAATTGCTTGGAAGCAATGAAAGTTCTTCTTCTAGTCATCAGGGTGGTGGAGCAAGTGCCAAT
ACGCCAACGCTTGATAGCCTAGCAAGAGACCTTACTGTCATAGCACGAGACAATGGTTTAGACCCCGTTATTGGCAGAAG
CAAAGAAATTGAGCGAGTGATTGAAGTTCTTAGCCGACGGACGAAAAACAATCCGGTTCTTATTGGTGAGCCCGGTGTAG
GTAAGACAGCAATCGCTGAGGGCCTTGCGCAGCAAATTATTAATAATGAAGTACCTGAGACTCTCCGTGATAAGCGTGTG
ATGACGCTTGATATGGGTACTGTAGTAGCCGGAACGAAATACCGTGGTGAATTCGAAGATCGTTTAAAGAAAGTAATGGA
TGAAATTCGTCAGGCAGGCAATATCATTTTATTCATTGATGAACTTCATACGCTTATTGGAGCTGGTGGGGCAGAAGGTG
CAATTGATGCATCGAATATCCTCAAGCCGGCACTAGCAAGAGGGGAGCTTCAATGTATTGGTGCGACAACACTTGACGAG
TATCGTAAATATATTGAGAAGGATGCGGCACTGGAAAGACGTTTCCAACCAATACAGGTAAATGAACCGACAAGTGATGA
ATCGGCGCTTATCTTAAAAGGTCTGCGTGATCGTTATGAAGCGCATCACCGCGTTACAATTACAGATGATGCTATTGAAG
CCGCTGTTAAGCTTTCAGATCGATATATATCAGATCGTTTTCTACCAGATAAAGCGATTGACTTAATTGACGAAGCTGCT
TCGAAAGTTCGTCTACGTTCTTATACAGCACCACCGAATTTGAAAGAGCTTGATAAGAAGCTGGAAGAAGTTCGAAAAGA
AAAAGATGCTGCTGTTCAAAGTCAAGAATTTGAGAAAGCCGCTTCTCTTCGCGACTCTGAGCAACGCTTACGTGAGCAGC
TTGAGCAAACGAAGAAAGAATGGAAAGAAAAGCAAGGCAAAGAGAATCAAGAAGTTACACCAGAAGATATTGCGATTGTC
GTTGCCAATTGGACCGGAATCCCGGTCTCCAAACTAGAAGAGCAGGAAACAGAGCGACTGTTGAAGATGGAAGAGATTCT
TCATAATCGTCTGATTGGTCAAGAAGAAGCTGTTAAATCAATTTCAAAAGCAGTTCGACGTGCTCGTGCTGGTCTTAAGG
ATCCTAAACGCCCAATTGGTTCATTCATTTTCCTTGGACCAACTGGTGTTGGTAAGACCGAACTCGCTCGTGCAGTTGCT
GAAACGCTATTTGGTGAAGAAGATTCTGTAATCCGTATTGATATGTCTGAGTACATGGAGAAACACTCAACGTCACGCCT
TGTTGGTTCACCTCCAGGATATGTTGGCTATGAAGAAGGCGGTCAGTTAACTGAGAAGGTAAGACGCAAACCTTATTCTG
TTATCTTGCTAGATGAGATTGAAAAAGCACACCCAGACGTGTTTAATATTCTATTACAAGTGCTAGAAGATGGACGATTG
ACTGATTCTAAAGGGCGTGTAGTTGATTTCCGTAATACAGTAGTCATTATGACGTCAAACGTTGGGGCTAGCACGCTTAA
GCGCAATAAATATGTTGGGTTCTCAACAGGATCTGAAGGTCAGGAATATAGTGATATGAAAGGTAAAGTGATGGATGATC
TCAAGAAGACTTTCCGTCCGGAGTTCTTGAACCGTATTGATGAGACGATCGTATTCCATTCCCTTGAAAAGAAACACTTG
AAAGAAATCATAGTCCTTATGGCCAACCAACTTAAGGCTCGTCTATCTGATCATGGGATTGATTTTGAACTAACTGATTC
TGCACTTGATAAAATTTCTGAAGAAGGCTATGATCCAGAATATGGTGCTCGACCGCTTAGAAGAGCTCTACAGCGTCATA
TTGAAGACCGTCTTTCTGAAGAATTGTTAAAAGGAAATATTGAAAAAGGTCAGCGAGTGAAGATTGATTACAAAGAGAAC
GATTTTGTTGTCGAAACGCTTTCTGAAGCAACTTCATCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
83.231 |
99.754 |
0.83 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
47.88 |
98.647 |
0.472 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.521 |
100 |
0.462 |
| clpC | Streptococcus thermophilus LMD-9 |
45.576 |
100 |
0.462 |
| clpC | Streptococcus mutans UA159 |
44.714 |
100 |
0.453 |
| clpC | Streptococcus pneumoniae D39 |
45.342 |
99.016 |
0.449 |
| clpC | Streptococcus pneumoniae Rx1 |
45.342 |
99.016 |
0.449 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.217 |
99.016 |
0.448 |
| clpE | Streptococcus mutans UA159 |
53.272 |
80.812 |
0.431 |
| clpE | Streptococcus pneumoniae R6 |
52.527 |
80.32 |
0.422 |
| clpE | Streptococcus pneumoniae Rx1 |
52.527 |
80.32 |
0.422 |
| clpE | Streptococcus pneumoniae D39 |
52.527 |
80.32 |
0.422 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.147 |
80.197 |
0.418 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
49.273 |
84.625 |
0.417 |