Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   FJM75_RS05410 Genome accession   NZ_CP041063
Coordinates   1057862..1058662 (-) Length   266 a.a.
NCBI ID   WP_165996585.1    Uniprot ID   -
Organism   Bacillus sp. Cs-700     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 1052862..1063662
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FJM75_RS05390 bcd 1053049..1054146 (-) 1098 WP_098444152.1 branched-chain amino acid dehydrogenase -
  FJM75_RS05395 yqiS 1054178..1055074 (-) 897 WP_165996581.1 phosphate butyryltransferase -
  FJM75_RS05400 - 1055191..1057266 (-) 2076 WP_165996583.1 sigma-54-dependent Fis family transcriptional regulator -
  FJM75_RS05405 - 1057442..1057681 (+) 240 WP_237438544.1 DUF2627 domain-containing protein -
  FJM75_RS05410 spo0A 1057862..1058662 (-) 801 WP_165996585.1 sporulation transcription factor Spo0A Regulator
  FJM75_RS05415 spoIVB 1058907..1060202 (-) 1296 WP_165996587.1 SpoIVB peptidase -
  FJM75_RS05420 recN 1060327..1062024 (-) 1698 WP_160918835.1 DNA repair protein RecN Machinery gene
  FJM75_RS05425 argR 1062058..1062507 (-) 450 WP_098444159.1 transcriptional regulator ArgR -
  FJM75_RS05430 - 1062675..1063481 (-) 807 WP_165996589.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30129.46 Da        Isoelectric Point: 5.9139

>NTDB_id=369230 FJM75_RS05410 WP_165996585.1 1057862..1058662(-) (spo0A) [Bacillus sp. Cs-700]
MQKIKVCLADDNRELVNLIEEYMSRQEDMEVVGTASNGQECLEVLEDQEPDVLVLDIIMPHLDGLAVLERLREMNYTCSV
IMLTAFGQEDVTKKAVDLGASYFILKPFDMDNLASHVRQVSGKKTTFTTSNGSYKRPQRESRPRNLDASITSIIHEIGVP
AHIKGYMYLREAITMVYNDIELLGSITKVLYPDIAKKFNTTSSRVERAIRHAIEVAWSRGNVESISNLFGYTVSMSKAKP
TNSEFIAMVADKLRIEHNMDNYSHTR

Nucleotide


Download         Length: 801 bp        

>NTDB_id=369230 FJM75_RS05410 WP_165996585.1 1057862..1058662(-) (spo0A) [Bacillus sp. Cs-700]
GTGCAAAAAATAAAAGTATGTCTAGCTGATGATAATCGCGAATTGGTGAATTTAATTGAGGAATATATGTCACGACAAGA
GGATATGGAGGTAGTCGGAACCGCTTCCAATGGTCAGGAATGCTTAGAAGTTCTTGAAGATCAAGAACCTGATGTACTTG
TACTTGATATTATTATGCCGCATTTAGATGGCCTGGCTGTTCTCGAACGTTTAAGAGAAATGAATTATACTTGTAGCGTT
ATTATGCTCACTGCCTTCGGTCAGGAAGACGTAACGAAAAAAGCAGTAGATTTAGGAGCATCCTACTTTATTTTAAAACC
GTTTGATATGGATAATTTAGCAAGTCATGTAAGGCAAGTGAGTGGTAAGAAAACAACATTTACAACAAGTAATGGCTCAT
ATAAGCGTCCTCAGCGTGAAAGTCGCCCTAGAAATCTTGATGCGAGCATCACGAGTATTATTCATGAAATCGGGGTACCG
GCACATATTAAAGGTTATATGTACTTAAGAGAAGCGATTACGATGGTTTATAATGATATTGAACTATTAGGTTCAATCAC
GAAGGTCCTATATCCTGATATTGCGAAAAAATTCAATACAACTTCATCCAGGGTTGAACGTGCGATTCGTCATGCGATTG
AGGTTGCTTGGAGTAGAGGGAATGTAGAGTCTATTTCAAACTTGTTTGGCTATACAGTGAGTATGTCTAAAGCGAAACCA
ACAAATTCTGAGTTCATTGCAATGGTTGCTGATAAGCTTCGGATTGAGCACAACATGGATAATTATTCTCACACTAGGTA
A

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-117)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(150-253)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

76.515

99.248

0.759

Multiple sequence alignment