Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FIV54_RS03520 | Genome accession | NZ_CP041037 |
| Coordinates | 694983..695378 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain NP66 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 689983..700378
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FIV54_RS03490 (FIV54_03490) | - | 691241..691645 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| FIV54_RS03495 (FIV54_03495) | - | 691983..692075 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| FIV54_RS03500 (FIV54_03500) | - | 692207..692440 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| FIV54_RS03505 (FIV54_03505) | murA | 692551..693816 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| FIV54_RS03510 (FIV54_03510) | fabZ | 693850..694290 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| FIV54_RS03515 (FIV54_03515) | - | 694349..694789 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| FIV54_RS03520 (FIV54_03520) | ssb | 694983..695378 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| FIV54_RS03525 (FIV54_03525) | sceD | 695768..696463 (+) | 696 | WP_000752001.1 | lytic transglycosylase SceD | - |
| FIV54_RS03530 (FIV54_03535) | tenA | 696987..697676 (+) | 690 | WP_000396073.1 | thiaminase II | - |
| FIV54_RS03535 (FIV54_03540) | thiD | 697669..698499 (+) | 831 | WP_000594960.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| FIV54_RS03540 (FIV54_03545) | thiM | 698483..699274 (+) | 792 | WP_001108480.1 | hydroxyethylthiazole kinase | - |
| FIV54_RS03545 (FIV54_03550) | thiE | 699276..699917 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=369102 FIV54_RS03520 WP_000932694.1 694983..695378(+) (ssb) [Staphylococcus aureus strain NP66]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=369102 FIV54_RS03520 WP_000932694.1 694983..695378(+) (ssb) [Staphylococcus aureus strain NP66]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |