Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | FIM01_RS01665 | Genome accession | NZ_CP041035 |
| Coordinates | 352988..353515 (+) | Length | 175 a.a. |
| NCBI ID | WP_000695059.1 | Uniprot ID | A0A0D5YDP9 |
| Organism | Acinetobacter baumannii strain 11W359501 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 347988..358515
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FIM01_RS01650 (FIM01_01650) | pilM | 350541..351599 (+) | 1059 | WP_002014066.1 | pilus assembly protein PilM | Machinery gene |
| FIM01_RS01655 (FIM01_01655) | pilN | 351599..352240 (+) | 642 | WP_139893747.1 | PilN domain-containing protein | Machinery gene |
| FIM01_RS01660 (FIM01_01660) | pilO | 352237..352977 (+) | 741 | WP_000076101.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| FIM01_RS01665 (FIM01_01665) | pilP | 352988..353515 (+) | 528 | WP_000695059.1 | pilus assembly protein PilP | Machinery gene |
| FIM01_RS01670 (FIM01_01670) | pilQ | 353578..355743 (+) | 2166 | WP_001017040.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| FIM01_RS01675 (FIM01_01675) | aroK | 355755..356324 (+) | 570 | WP_000643712.1 | shikimate kinase AroK | - |
| FIM01_RS01680 (FIM01_01680) | aroB | 356353..357435 (+) | 1083 | WP_001193997.1 | 3-dehydroquinate synthase | - |
| FIM01_RS01685 (FIM01_01685) | - | 357451..358326 (+) | 876 | WP_000218810.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19371.59 Da Isoelectric Point: 9.0270
>NTDB_id=369032 FIM01_RS01665 WP_000695059.1 352988..353515(+) (pilP) [Acinetobacter baumannii strain 11W359501]
MKIKQITLCVLASVVLVGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTPVPQFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQTPDQQIERVQVGNYMGMNQGRITHISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
MKIKQITLCVLASVVLVGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTPVPQFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQTPDQQIERVQVGNYMGMNQGRITHISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
Nucleotide
Download Length: 528 bp
>NTDB_id=369032 FIM01_RS01665 WP_000695059.1 352988..353515(+) (pilP) [Acinetobacter baumannii strain 11W359501]
ATGAAAATTAAGCAAATTACTCTTTGTGTTTTGGCGAGTGTTGTGCTTGTCGGTTGTGATTCAAGAATTGATGCAGTAAA
TCAGGAAATGGCCAATATTCGTAATCAGCCGCCACTCCCTATTGAACCAGCACCGATTTTTACTCCTGTACCACAATTTA
ATTACGCTGCTCATCAATTAAAAAGCCCATTTATGCCAAGTTCTCTTGCTGCCGAGCTCAAGATTATGGCGGGGAAACGG
GTTTATCCGAATTTCTCACGTGCGCCGCAACCACTCGAAAGTTATGCACTTGAAGCTTTAAATATGAAAGGGAGCATGCG
TAATAATCGAGGGCAGATATTGGCCCTGATCCAGACACCGGATCAGCAGATTGAACGGGTACAAGTGGGTAACTATATGG
GTATGAATCAGGGCCGTATCACCCATATTAGTCCAACCCAGATTGATCTGGTTGAAATCGTACCGGATGGTCGAGAAGGC
TATGTCGAAAGACCGAGAACCTTGGTCTTGATTGGGCCTGCACCCTAA
ATGAAAATTAAGCAAATTACTCTTTGTGTTTTGGCGAGTGTTGTGCTTGTCGGTTGTGATTCAAGAATTGATGCAGTAAA
TCAGGAAATGGCCAATATTCGTAATCAGCCGCCACTCCCTATTGAACCAGCACCGATTTTTACTCCTGTACCACAATTTA
ATTACGCTGCTCATCAATTAAAAAGCCCATTTATGCCAAGTTCTCTTGCTGCCGAGCTCAAGATTATGGCGGGGAAACGG
GTTTATCCGAATTTCTCACGTGCGCCGCAACCACTCGAAAGTTATGCACTTGAAGCTTTAAATATGAAAGGGAGCATGCG
TAATAATCGAGGGCAGATATTGGCCCTGATCCAGACACCGGATCAGCAGATTGAACGGGTACAAGTGGGTAACTATATGG
GTATGAATCAGGGCCGTATCACCCATATTAGTCCAACCCAGATTGATCTGGTTGAAATCGTACCGGATGGTCGAGAAGGC
TATGTCGAAAGACCGAGAACCTTGGTCTTGATTGGGCCTGCACCCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
98.286 |
100 |
0.983 |
| comL | Acinetobacter baylyi ADP1 |
71.839 |
99.429 |
0.714 |