Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Regulator
Locus tag   FIU24_RS30990 Genome accession   NZ_CP041013
Coordinates   6395658..6396065 (-) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa strain FDAARGOS_610     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 6390658..6401065
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FIU24_RS30970 (FIU24_30970) pilK 6391590..6392465 (-) 876 WP_004352088.1 type 4 fimbrial methyltransferase PilK -
  FIU24_RS30975 (FIU24_30975) pilJ 6392526..6394574 (-) 2049 WP_003084592.1 chemotaxis chemoreceptor PilJ -
  FIU24_RS30980 (FIU24_30980) - 6394659..6395195 (-) 537 WP_003084590.1 chemotaxis protein CheW -
  FIU24_RS30985 (FIU24_30985) pilH 6395246..6395611 (-) 366 WP_003084587.1 twitching motility response regulator PilH -
  FIU24_RS30990 (FIU24_30990) pilG 6395658..6396065 (-) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  FIU24_RS30995 (FIU24_30995) gshB 6396320..6397273 (+) 954 WP_003100943.1 glutathione synthase -
  FIU24_RS31000 (FIU24_31000) - 6397420..6398313 (+) 894 WP_003084580.1 TonB family protein -
  FIU24_RS31005 (FIU24_31005) - 6398362..6398931 (+) 570 WP_003100947.1 YqgE/AlgH family protein -
  FIU24_RS31010 (FIU24_31010) ruvX 6398931..6399365 (+) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  FIU24_RS31015 (FIU24_31015) pyrR 6399477..6399989 (+) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  FIU24_RS31020 (FIU24_31020) - 6400013..6401017 (+) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -

Sequence


Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=368866 FIU24_RS30990 WP_003084583.1 6395658..6396065(-) (pilG) [Pseudomonas aeruginosa strain FDAARGOS_610]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=368866 FIU24_RS30990 WP_003084583.1 6395658..6396065(-) (pilG) [Pseudomonas aeruginosa strain FDAARGOS_610]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCACTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704

  vicR Streptococcus mutans UA159

44.444

86.667

0.385


Multiple sequence alignment