Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | FIU24_RS05835 | Genome accession | NZ_CP041013 |
| Coordinates | 1241840..1242397 (-) | Length | 185 a.a. |
| NCBI ID | WP_003119423.1 | Uniprot ID | - |
| Organism | Pseudomonas aeruginosa strain FDAARGOS_610 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1236840..1247397
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FIU24_RS05820 (FIU24_05820) | pilY1 | 1236932..1240423 (-) | 3492 | WP_003123397.1 | type 4a pilus biogenesis protein PilY1 | - |
| FIU24_RS05825 (FIU24_05825) | pilX | 1240435..1241022 (-) | 588 | WP_003112826.1 | type 4a pilus minor pilin PilX | - |
| FIU24_RS05830 (FIU24_05830) | pilW | 1241019..1241843 (-) | 825 | WP_004352757.1 | type 4a pilus minor pilin PilW | - |
| FIU24_RS05835 (FIU24_05835) | pilV | 1241840..1242397 (-) | 558 | WP_003119423.1 | type 4a pilus minor pilin PilV | Machinery gene |
| FIU24_RS05840 (FIU24_05840) | - | 1242388..1242894 (-) | 507 | WP_003102598.1 | GspH/FimT family pseudopilin | - |
| FIU24_RS05845 (FIU24_05845) | - | 1243000..1243509 (-) | 510 | WP_003161431.1 | GspH/FimT family pseudopilin | - |
| FIU24_RS05850 (FIU24_05850) | thiO | 1243644..1244738 (+) | 1095 | WP_003119424.1 | glycine oxidase ThiO | - |
| FIU24_RS05855 (FIU24_05855) | pilR | 1244784..1246121 (-) | 1338 | WP_003094694.1 | two-component system response regulator PilR | Regulator |
Sequence
Protein
Download Length: 185 a.a. Molecular weight: 20061.15 Da Isoelectric Point: 8.2255
>NTDB_id=368844 FIU24_RS05835 WP_003119423.1 1241840..1242397(-) (pilV) [Pseudomonas aeruginosa strain FDAARGOS_610]
MLLKSRHRSLHQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
MLLKSRHRSLHQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
Nucleotide
Download Length: 558 bp
>NTDB_id=368844 FIU24_RS05835 WP_003119423.1 1241840..1242397(-) (pilV) [Pseudomonas aeruginosa strain FDAARGOS_610]
ATGCTATTGAAATCGCGACACAGGTCGCTGCACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTTGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
ATGCTATTGAAATCGCGACACAGGTCGCTGCACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTTGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
99.459 |
100 |
0.995 |