Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FIU19_RS10090 | Genome accession | NZ_CP041010 |
| Coordinates | 1870968..1871363 (-) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain FDAARGOS_766 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1865968..1876363
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FIU19_RS10065 (FIU19_10060) | thiE | 1866568..1867209 (-) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
| FIU19_RS10070 (FIU19_10065) | thiM | 1867211..1868002 (-) | 792 | WP_001108479.1 | hydroxyethylthiazole kinase | - |
| FIU19_RS10075 (FIU19_10070) | thiD | 1867986..1868816 (-) | 831 | WP_000594959.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| FIU19_RS10080 (FIU19_10075) | tenA | 1868809..1869498 (-) | 690 | WP_000396077.1 | thiaminase II | - |
| FIU19_RS10085 (FIU19_10080) | sceD | 1869884..1870579 (-) | 696 | WP_000752008.1 | lytic transglycosylase SceD | - |
| FIU19_RS10090 (FIU19_10085) | ssb | 1870968..1871363 (-) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| FIU19_RS10095 (FIU19_10090) | - | 1871557..1871997 (+) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| FIU19_RS10100 (FIU19_10095) | fabZ | 1872056..1872496 (-) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| FIU19_RS10105 (FIU19_10100) | murA | 1872530..1873795 (-) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| FIU19_RS10110 (FIU19_10105) | - | 1873906..1874139 (-) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| FIU19_RS10115 (FIU19_10110) | - | 1874271..1874363 (-) | 93 | WP_001790611.1 | hypothetical protein | - |
| FIU19_RS10120 (FIU19_10115) | - | 1874701..1875105 (-) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=368792 FIU19_RS10090 WP_000932694.1 1870968..1871363(-) (ssb) [Staphylococcus aureus strain FDAARGOS_766]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=368792 FIU19_RS10090 WP_000932694.1 1870968..1871363(-) (ssb) [Staphylococcus aureus strain FDAARGOS_766]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |