Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   FIU13_RS06915 Genome accession   NZ_CP040997
Coordinates   1321943..1323013 (+) Length   356 a.a.
NCBI ID   WP_010921893.1    Uniprot ID   A0A4U9C068
Organism   Streptococcus pyogenes strain FDAARGOS_774     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1316943..1328013
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FIU13_RS06900 (FIU13_06900) amiA 1317471..1319441 (+) 1971 WP_011285389.1 peptide ABC transporter substrate-binding protein Regulator
  FIU13_RS06905 (FIU13_06905) amiC 1319506..1321008 (+) 1503 WP_010921891.1 ABC transporter permease Regulator
  FIU13_RS06910 (FIU13_06910) amiD 1321008..1321934 (+) 927 WP_010921892.1 oligopeptide ABC transporter permease OppC Regulator
  FIU13_RS06915 (FIU13_06915) amiE 1321943..1323013 (+) 1071 WP_010921893.1 ABC transporter ATP-binding protein Regulator
  FIU13_RS06920 (FIU13_06920) amiF 1323006..1323929 (+) 924 WP_002986000.1 ABC transporter ATP-binding protein Regulator
  FIU13_RS10490 (FIU13_06925) - 1323967..1324050 (-) 84 Protein_1282 IS3 family transposase -

Sequence


Protein


Download         Length: 356 a.a.        Molecular weight: 39703.77 Da        Isoelectric Point: 5.6707

>NTDB_id=368621 FIU13_RS06915 WP_010921893.1 1321943..1323013(+) (amiE) [Streptococcus pyogenes strain FDAARGOS_774]
MTKENNVILTAKDVVVEFDVRDRVLTAIRNVSLELVEGEVLAFVGESGSGKSVLTKTFTGMLESNGRIANGSIVYRGQEL
TDLKTNKEWAKIRGSKIATIFQDPMTSLSPIKTIGSQITEVIIKHQKVSHAKAKEMALDYMNKVGIPNAKKRFEDYPFEY
SGGMRQRIVIAIALACRPDILICDEPTTALDVTIQAQIVELLKSLQREYHFTIIFITHDLGVVASIADKVAVMYAGEIVE
FGTVEEIFYDPRHPYTWSLLSSLPQLADESGELYAIPGTPPSLYSPIIGDAFALRSEYAMVLDFEKAPPAINVSETHWAK
TWLLHPEAPKVQKPEVIQDLHQKILRKMSQQEEGNV

Nucleotide


Download         Length: 1071 bp        

>NTDB_id=368621 FIU13_RS06915 WP_010921893.1 1321943..1323013(+) (amiE) [Streptococcus pyogenes strain FDAARGOS_774]
ATGACAAAAGAAAATAATGTAATCTTAACTGCCAAAGATGTGGTGGTAGAATTTGATGTGCGTGATCGTGTTTTAACAGC
TATCCGTAACGTCTCACTGGAACTTGTTGAAGGAGAAGTCCTTGCTTTTGTAGGGGAATCAGGCTCAGGTAAATCTGTTT
TAACAAAGACCTTTACAGGGATGTTGGAGTCTAATGGACGCATTGCTAATGGTTCAATTGTCTATCGTGGGCAAGAATTG
ACAGATTTAAAAACAAATAAAGAGTGGGCAAAGATTCGCGGCTCAAAAATCGCAACGATTTTCCAAGACCCAATGACCAG
TCTTAGTCCCATTAAAACTATCGGTAGCCAAATCACAGAAGTGATTATTAAGCACCAAAAAGTAAGTCATGCCAAAGCTA
AAGAAATGGCCCTTGATTACATGAATAAAGTGGGTATCCCAAATGCCAAAAAACGCTTTGAAGATTACCCATTTGAGTAT
TCAGGAGGAATGCGTCAACGTATTGTTATCGCTATTGCTTTAGCTTGTCGCCCAGATATTCTTATCTGTGATGAGCCAAC
AACAGCCCTTGATGTGACTATTCAAGCTCAAATCGTTGAGTTATTGAAGTCGCTTCAACGAGAATATCATTTCACCATTA
TCTTTATTACGCACGATTTAGGTGTTGTGGCAAGCATTGCAGATAAAGTGGCTGTCATGTATGCAGGAGAAATTGTTGAA
TTTGGAACAGTCGAAGAGATTTTCTATGATCCAAGACACCCCTATACATGGAGTTTGCTGTCTAGCTTACCGCAGTTGGC
AGATGAATCTGGTGAACTTTACGCTATTCCAGGAACGCCTCCATCACTTTATTCACCAATTATCGGAGATGCCTTTGCAC
TTCGCTCAGAATATGCTATGGTTTTAGACTTTGAAAAAGCACCTCCGGCGATTAACGTATCTGAGACTCATTGGGCCAAA
ACATGGCTTTTACACCCAGAGGCTCCAAAAGTTCAAAAACCAGAAGTCATTCAAGATTTGCATCAAAAAATCTTAAGAAA
AATGTCACAACAGGAGGAAGGAAATGTCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4U9C068

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

76.667

100

0.775

  amiE Streptococcus thermophilus LMG 18311

75.556

100

0.764

  amiE Streptococcus thermophilus LMD-9

75.556

100

0.764

  oppD Streptococcus mutans UA159

56.677

94.663

0.537


Multiple sequence alignment