Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   SSPS47_RS19530 Genome accession   NZ_CP048397
Coordinates   4369981..4371114 (-) Length   377 a.a.
NCBI ID   WP_078075735.1    Uniprot ID   A0A1U9QSN1
Organism   Streptomyces sp. S4.7     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4364981..4376114
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SSPS47_RS19505 (SSPS47_19750) - 4365259..4366125 (-) 867 WP_164252181.1 hypothetical protein -
  SSPS47_RS19510 (SSPS47_19755) - 4366113..4366733 (-) 621 WP_164252182.1 SigE family RNA polymerase sigma factor -
  SSPS47_RS19515 (SSPS47_19760) - 4367037..4367948 (-) 912 WP_164252183.1 A/G-specific adenine glycosylase -
  SSPS47_RS19520 (SSPS47_19765) - 4368102..4368866 (-) 765 WP_164252184.1 phosphatase PAP2 family protein -
  SSPS47_RS19525 (SSPS47_19770) - 4369048..4369890 (+) 843 WP_164252185.1 hypothetical protein -
  SSPS47_RS19530 (SSPS47_19775) disA 4369981..4371114 (-) 1134 WP_078075735.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  SSPS47_RS19535 (SSPS47_19780) radA/sms 4371159..4372571 (-) 1413 WP_164252186.1 DNA repair protein RadA Machinery gene
  SSPS47_RS19540 (SSPS47_19785) - 4372678..4374546 (+) 1869 WP_239064984.1 hypothetical protein -
  SSPS47_RS19545 (SSPS47_19790) - 4374572..4375390 (-) 819 WP_147878339.1 hypothetical protein -

Sequence


Protein


Download         Length: 377 a.a.        Molecular weight: 40512.47 Da        Isoelectric Point: 4.9406

>NTDB_id=368517 SSPS47_RS19530 WP_078075735.1 4369981..4371114(-) (disA) [Streptomyces sp. S4.7]
MAANDRAAAPGKSGGGSGGSGTEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDKTVETMCTGGFVLDVEFTAT
RLRELCKLDGALILDKDITKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVISVSQSMRLIALYVDGERRVLEE
SAAILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVSQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDE
LIAGVEPERELVVRDYVPEPTAKRSRTVAEAMTELDALSHTELLELPVVARALGYSGSPETLDSAVSPRGYRLLAKVPRL
PGAIIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1134 bp        

>NTDB_id=368517 SSPS47_RS19530 WP_078075735.1 4369981..4371114(-) (disA) [Streptomyces sp. S4.7]
GTGGCAGCCAACGACCGGGCAGCAGCACCCGGAAAGTCCGGTGGTGGCTCCGGTGGATCCGGCACCGAAGCGCTGATGCG
CGCCTCACTGAGCGCCGTAGCGCCCGGCATGGCGCTGCGTGACGGGCTGGAGCGGATCCTCCGGGGGAACACCGGCGGTC
TCATCGTCCTGGGCATGGACAAGACCGTCGAGACGATGTGCACGGGCGGCTTCGTGCTGGACGTGGAATTCACCGCCACG
AGGCTCCGCGAGCTCTGCAAGCTCGACGGCGCGCTCATTCTCGACAAAGACATCACCAAAATTCTGCGGGCCGGTGTCCA
GCTCGTGCCCGACGCCTCCATCCCCACCGAGGAGACCGGCACGCGCCACCGCACGGCGGACCGGGTGTCCAAGCAGTGCG
GGTTCCCGGTGATCTCCGTGTCCCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGGGAGCGCCGGGTCCTGGAGGAG
TCGGCGGCGATCCTGTCGCGCGCCAACCAGGCGCTGGCGACCCTGGAGCGGTACAAGCTCCGGCTGGACGAGGTCGCGGG
CACGCTCTCCGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTGACGGCGGTGTCGCAGCGCCTGGAGATGGTGC
GCAGGATCGCCACGGAGATCGCCGAGTACGTGGTCGAGTTGGGCACCGACGGGCGGCTTCTCTCCCTCCAGCTCGACGAG
TTGATCGCGGGCGTCGAGCCCGAGCGTGAGCTCGTCGTACGGGACTACGTGCCCGAGCCGACGGCGAAGCGGTCGCGCAC
GGTCGCCGAGGCGATGACCGAGCTTGACGCGCTCTCCCACACGGAGCTGCTGGAACTGCCCGTCGTGGCCCGTGCGTTGG
GCTACAGCGGTTCGCCCGAGACACTGGACTCGGCGGTCTCACCGCGCGGCTACCGGCTGCTGGCCAAGGTGCCGCGTCTG
CCGGGCGCCATCATCGAGCGGCTGGTCGAGCACTTCGGCGGTCTCCAGAAGCTGCTGGCGGCGAGCGTCGACGATCTCCA
GACGGTGGACGGCGTGGGCGAGGCGCGGGCGCGCAGCGTGCGCGAGGGGCTGTCGCGGCTTGCGGAGTCGTCGATTTTGG
AGCGGTACGTCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1U9QSN1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.938

94.695

0.435