Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | FIU05_RS04880 | Genome accession | NZ_CP040987 |
| Coordinates | 1077713..1078126 (-) | Length | 137 a.a. |
| NCBI ID | WP_015444381.1 | Uniprot ID | - |
| Organism | Legionella pneumophila strain FDAARGOS_779 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1072713..1083126
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FIU05_RS04870 (FIU05_04870) | letS | 1073643..1076375 (+) | 2733 | WP_010947629.1 | two-component system sensor histidine kinase LetS | Regulator |
| FIU05_RS04875 (FIU05_04875) | - | 1076472..1077716 (+) | 1245 | WP_010947630.1 | 6-phosphofructokinase | - |
| FIU05_RS04880 (FIU05_04880) | pilA2 | 1077713..1078126 (-) | 414 | WP_015444381.1 | pilin | Machinery gene |
| FIU05_RS04885 (FIU05_04885) | pilA2 | 1078323..1078733 (-) | 411 | WP_016356941.1 | pilin | Machinery gene |
| FIU05_RS04890 (FIU05_04890) | - | 1079036..1079353 (+) | 318 | WP_010947633.1 | BolA family protein | - |
| FIU05_RS04895 (FIU05_04895) | - | 1079428..1080849 (+) | 1422 | WP_010947634.1 | APC family permease | - |
| FIU05_RS04900 (FIU05_04900) | - | 1080980..1082410 (-) | 1431 | WP_010947635.1 | cellulase family glycosylhydrolase | - |
Sequence
Protein
Download Length: 137 a.a. Molecular weight: 14505.91 Da Isoelectric Point: 6.2016
>NTDB_id=368441 FIU05_RS04880 WP_015444381.1 1077713..1078126(-) (pilA2) [Legionella pneumophila strain FDAARGOS_779]
MRMKGFTLIELMIVAAILGILVAIAIPAYQDYTIRARVVEGLEMASAAKLAVVETSLIDNTLPANQADTGYTSPAPTINV
ASIAIGNQGIITITYTANAGNGTITMVPTIDATNRILTWDCTGGTLISKYRPAYCRP
MRMKGFTLIELMIVAAILGILVAIAIPAYQDYTIRARVVEGLEMASAAKLAVVETSLIDNTLPANQADTGYTSPAPTINV
ASIAIGNQGIITITYTANAGNGTITMVPTIDATNRILTWDCTGGTLISKYRPAYCRP
Nucleotide
Download Length: 414 bp
>NTDB_id=368441 FIU05_RS04880 WP_015444381.1 1077713..1078126(-) (pilA2) [Legionella pneumophila strain FDAARGOS_779]
ATGAGAATGAAAGGATTTACTTTAATCGAGCTGATGATCGTTGCCGCTATCCTTGGGATTCTGGTTGCCATCGCAATTCC
AGCCTATCAGGACTATACCATCAGAGCACGGGTGGTCGAAGGATTGGAAATGGCTTCGGCCGCTAAATTAGCTGTTGTTG
AAACGAGTTTAATTGATAACACTTTGCCAGCAAATCAGGCAGATACGGGCTATACCAGTCCTGCCCCAACAATTAATGTA
GCCTCTATAGCCATTGGTAATCAAGGCATTATTACCATTACCTACACTGCAAACGCAGGTAATGGTACCATTACAATGGT
TCCCACAATAGATGCCACTAACAGAATACTCACTTGGGATTGCACTGGTGGTACCCTGATTAGTAAATATCGTCCAGCCT
ACTGCCGCCCTTAA
ATGAGAATGAAAGGATTTACTTTAATCGAGCTGATGATCGTTGCCGCTATCCTTGGGATTCTGGTTGCCATCGCAATTCC
AGCCTATCAGGACTATACCATCAGAGCACGGGTGGTCGAAGGATTGGAAATGGCTTCGGCCGCTAAATTAGCTGTTGTTG
AAACGAGTTTAATTGATAACACTTTGCCAGCAAATCAGGCAGATACGGGCTATACCAGTCCTGCCCCAACAATTAATGTA
GCCTCTATAGCCATTGGTAATCAAGGCATTATTACCATTACCTACACTGCAAACGCAGGTAATGGTACCATTACAATGGT
TCCCACAATAGATGCCACTAACAGAATACTCACTTGGGATTGCACTGGTGGTACCCTGATTAGTAAATATCGTCCAGCCT
ACTGCCGCCCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila str. Paris |
72.993 |
100 |
0.73 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
72.263 |
100 |
0.723 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
45.732 |
100 |
0.547 |
| comP | Acinetobacter baylyi ADP1 |
45.89 |
100 |
0.489 |
| pilA/pilA1 | Eikenella corrodens VA1 |
36.601 |
100 |
0.409 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
37.143 |
100 |
0.38 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
37.41 |
100 |
0.38 |
| pilA | Vibrio cholerae C6706 |
34.899 |
100 |
0.38 |
| pilA | Vibrio cholerae strain A1552 |
34.899 |
100 |
0.38 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
34.899 |
100 |
0.38 |