Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FHQ17_RS03735 | Genome accession | NZ_CP040883 |
| Coordinates | 810062..810457 (+) | Length | 131 a.a. |
| NCBI ID | WP_001829977.1 | Uniprot ID | A0A4Q9W3V8 |
| Organism | Staphylococcus epidermidis strain O47 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 805062..815457
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FHQ17_RS03710 (FHQ17_03885) | - | 806481..806885 (+) | 405 | WP_001829924.1 | F0F1 ATP synthase subunit epsilon | - |
| FHQ17_RS03715 (FHQ17_03890) | - | 807034..807267 (+) | 234 | WP_002456242.1 | DUF1146 family protein | - |
| FHQ17_RS03720 (FHQ17_03895) | murA | 807377..808642 (+) | 1266 | WP_001829978.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| FHQ17_RS03725 (FHQ17_03900) | fabZ | 808676..809113 (+) | 438 | WP_001829953.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| FHQ17_RS03730 (FHQ17_03905) | - | 809431..809871 (-) | 441 | WP_001829935.1 | YwpF-like family protein | - |
| FHQ17_RS03735 (FHQ17_03910) | ssb | 810062..810457 (+) | 396 | WP_001829977.1 | single-stranded DNA-binding protein | Machinery gene |
| FHQ17_RS03740 (FHQ17_03915) | - | 810845..811504 (+) | 660 | WP_001829904.1 | transglycosylase family protein | - |
| FHQ17_RS03745 (FHQ17_03920) | tenA | 811789..812478 (+) | 690 | WP_001829894.1 | thiaminase II | - |
| FHQ17_RS03750 (FHQ17_03925) | thiD | 812471..813292 (+) | 822 | WP_001832736.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| FHQ17_RS03755 (FHQ17_03930) | thiM | 813285..814073 (+) | 789 | WP_001829971.1 | hydroxyethylthiazole kinase | - |
| FHQ17_RS03760 (FHQ17_03935) | thiE | 814079..814717 (+) | 639 | WP_002505076.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15158.08 Da Isoelectric Point: 5.2661
>NTDB_id=367993 FHQ17_RS03735 WP_001829977.1 810062..810457(+) (ssb) [Staphylococcus epidermidis strain O47]
MLNKIVIVGRMTKDAQIYEKEDNKIATFCVATERNYKDDINEISTDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKNKNNETPSDNQFENNTYQPDDLEIIHI
MLNKIVIVGRMTKDAQIYEKEDNKIATFCVATERNYKDDINEISTDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKNKNNETPSDNQFENNTYQPDDLEIIHI
Nucleotide
Download Length: 396 bp
>NTDB_id=367993 FHQ17_RS03735 WP_001829977.1 810062..810457(+) (ssb) [Staphylococcus epidermidis strain O47]
ATGTTAAATAAAATAGTCATTGTTGGTAGAATGACGAAAGATGCTCAAATCTATGAAAAGGAGGATAACAAAATAGCAAC
ATTTTGCGTTGCTACAGAAAGAAACTACAAAGATGATATTAATGAAATTTCTACAGATTATTTACTTTGTAAAGCTTTCG
GTAAAACTGCCACTAATATTGAAAAGTACACTAGTCAAGGTACTTTAGTAGGTATAACTGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGCCAAACACATTTTGTTACAGAATTATACGTTGAAACAATAAAATTCATGTCCCCAAAAAATAAAAA
CAATGAAACTCCCTCTGATAATCAATTTGAAAACAACACTTATCAACCTGATGATTTAGAAATAATTCATATTTAA
ATGTTAAATAAAATAGTCATTGTTGGTAGAATGACGAAAGATGCTCAAATCTATGAAAAGGAGGATAACAAAATAGCAAC
ATTTTGCGTTGCTACAGAAAGAAACTACAAAGATGATATTAATGAAATTTCTACAGATTATTTACTTTGTAAAGCTTTCG
GTAAAACTGCCACTAATATTGAAAAGTACACTAGTCAAGGTACTTTAGTAGGTATAACTGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGCCAAACACATTTTGTTACAGAATTATACGTTGAAACAATAAAATTCATGTCCCCAAAAAATAAAAA
CAATGAAACTCCCTCTGATAATCAATTTGAAAACAACACTTATCAACCTGATGATTTAGAAATAATTCATATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
73.282 |
100 |
0.733 |
| ssb | Staphylococcus aureus MW2 |
72.519 |
100 |
0.725 |