Detailed information
Bioinformatically predicted
Overview
| Name | clpX | Type | Regulator |
| Locus tag | FDP16_RS06240 | Genome accession | NZ_CP040798 |
| Coordinates | 1223571..1224800 (-) | Length | 409 a.a. |
| NCBI ID | WP_002917310.1 | Uniprot ID | A0A3R9GT11 |
| Organism | Streptococcus sanguinis strain CGMH058 | ||
| Function | require for competence development (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1218571..1229800
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FDP16_RS06215 (FDP16_06470) | - | 1218745..1219542 (-) | 798 | WP_176798989.1 | formate/nitrite transporter family protein | - |
| FDP16_RS06220 (FDP16_06475) | mmuM | 1219630..1220559 (-) | 930 | WP_176798990.1 | homocysteine S-methyltransferase | - |
| FDP16_RS06225 (FDP16_06480) | - | 1220586..1221992 (-) | 1407 | WP_176798991.1 | amino acid permease | - |
| FDP16_RS06230 (FDP16_06485) | - | 1222125..1222826 (-) | 702 | WP_176798992.1 | glucosaminidase domain-containing protein | - |
| FDP16_RS06235 (FDP16_06490) | yihA | 1222973..1223560 (-) | 588 | WP_002915299.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
| FDP16_RS06240 (FDP16_06495) | clpX | 1223571..1224800 (-) | 1230 | WP_002917310.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | Regulator |
| FDP16_RS06245 (FDP16_06505) | - | 1225025..1225537 (-) | 513 | WP_176798993.1 | dihydrofolate reductase | - |
| FDP16_RS06250 (FDP16_06510) | - | 1225663..1226502 (-) | 840 | WP_176798994.1 | thymidylate synthase | - |
| FDP16_RS06255 (FDP16_06515) | - | 1226608..1227567 (-) | 960 | WP_002917315.1 | ROK family glucokinase | - |
| FDP16_RS06260 (FDP16_06525) | - | 1227680..1228090 (-) | 411 | WP_176798995.1 | GNAT family N-acetyltransferase | - |
Sequence
Protein
Download Length: 409 a.a. Molecular weight: 45587.02 Da Isoelectric Point: 4.3984
>NTDB_id=367222 FDP16_RS06240 WP_002917310.1 1223571..1224800(-) (clpX) [Streptococcus sanguinis strain CGMH058]
MPTSRNDDMMVFCSFCGKNQDEVQKIIAGNNAFICNECVELAQEIIREELAEEVLADLSEVPKPQELLNILNHYVIGQDR
AKRALAVAVYNHYKRINYHDSREEEDVELQKSNILMIGPTGSGKTFLAQTLARSLNVPFAIADATALTEAGYVGEDVENI
LLKLLQAADFNIERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPQQEMIQVDTK
NILFIVGGAFDGIEEIVKQRLGEKIIGFGQNNRAIDEDGSYMQEIISEDVQKFGIIPELIGRLPVFAALEQLTVDDLVRI
LKEPRNALIKQYQALLSYDDVKLEFDEDALQEIANKAIERKTGARGLRSIIEETMMDVMFEVPSQENVKLVRITKEAVDG
TDKPILETA
MPTSRNDDMMVFCSFCGKNQDEVQKIIAGNNAFICNECVELAQEIIREELAEEVLADLSEVPKPQELLNILNHYVIGQDR
AKRALAVAVYNHYKRINYHDSREEEDVELQKSNILMIGPTGSGKTFLAQTLARSLNVPFAIADATALTEAGYVGEDVENI
LLKLLQAADFNIERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPQQEMIQVDTK
NILFIVGGAFDGIEEIVKQRLGEKIIGFGQNNRAIDEDGSYMQEIISEDVQKFGIIPELIGRLPVFAALEQLTVDDLVRI
LKEPRNALIKQYQALLSYDDVKLEFDEDALQEIANKAIERKTGARGLRSIIEETMMDVMFEVPSQENVKLVRITKEAVDG
TDKPILETA
Nucleotide
Download Length: 1230 bp
>NTDB_id=367222 FDP16_RS06240 WP_002917310.1 1223571..1224800(-) (clpX) [Streptococcus sanguinis strain CGMH058]
ATGCCTACAAGTCGTAATGATGATATGATGGTTTTTTGTTCTTTCTGTGGGAAGAACCAAGATGAGGTGCAGAAGATTAT
CGCTGGTAACAATGCCTTTATCTGTAATGAATGTGTGGAGCTTGCGCAGGAAATCATCCGTGAAGAGCTAGCTGAGGAAG
TGCTGGCAGATCTGTCTGAAGTACCAAAACCTCAGGAGCTGCTGAATATCTTGAACCACTATGTTATCGGGCAAGACCGA
GCTAAGCGTGCCTTAGCAGTAGCGGTCTATAATCACTACAAGCGTATTAACTACCATGACAGCCGTGAAGAAGAAGATGT
GGAACTGCAAAAGTCAAATATTTTGATGATTGGCCCGACCGGGTCAGGTAAGACCTTCCTGGCGCAGACTCTTGCTCGCA
GTCTCAATGTGCCTTTTGCCATTGCGGACGCAACTGCTCTGACTGAAGCTGGTTATGTCGGGGAAGATGTTGAAAATATC
CTCCTCAAGCTTTTGCAGGCGGCTGACTTTAATATTGAACGTGCAGAACGCGGCATTATCTATGTTGATGAGATTGACAA
GATTGCTAAGAAAGGCGAGAACGTCTCTATTACTCGTGATGTTTCGGGTGAAGGAGTTCAGCAAGCTCTCTTGAAGATTA
TCGAAGGAACAGTAGCTAGTGTACCGCCGCAAGGTGGACGCAAGCATCCGCAGCAGGAAATGATTCAGGTTGATACCAAG
AATATTCTCTTCATTGTTGGCGGTGCTTTTGACGGTATCGAAGAAATTGTAAAACAGCGCTTGGGCGAGAAAATCATTGG
TTTCGGTCAGAATAACCGAGCAATTGACGAAGATGGGTCCTATATGCAGGAAATTATCTCAGAAGACGTTCAAAAATTTG
GAATTATTCCTGAGTTGATTGGCCGTTTACCTGTCTTTGCTGCGCTTGAGCAGCTGACGGTTGATGATTTGGTTCGGATT
TTGAAAGAGCCTAGAAACGCCCTTATTAAGCAGTATCAGGCACTCTTGTCCTATGATGATGTGAAGCTTGAATTTGACGA
AGATGCTCTGCAGGAGATTGCTAATAAAGCGATTGAACGTAAAACTGGTGCGCGCGGTCTTCGCTCTATCATTGAAGAAA
CTATGATGGATGTCATGTTTGAAGTTCCGAGTCAGGAAAATGTCAAACTTGTCCGCATTACCAAAGAAGCAGTAGATGGA
ACAGATAAGCCTATTCTAGAAACTGCCTAA
ATGCCTACAAGTCGTAATGATGATATGATGGTTTTTTGTTCTTTCTGTGGGAAGAACCAAGATGAGGTGCAGAAGATTAT
CGCTGGTAACAATGCCTTTATCTGTAATGAATGTGTGGAGCTTGCGCAGGAAATCATCCGTGAAGAGCTAGCTGAGGAAG
TGCTGGCAGATCTGTCTGAAGTACCAAAACCTCAGGAGCTGCTGAATATCTTGAACCACTATGTTATCGGGCAAGACCGA
GCTAAGCGTGCCTTAGCAGTAGCGGTCTATAATCACTACAAGCGTATTAACTACCATGACAGCCGTGAAGAAGAAGATGT
GGAACTGCAAAAGTCAAATATTTTGATGATTGGCCCGACCGGGTCAGGTAAGACCTTCCTGGCGCAGACTCTTGCTCGCA
GTCTCAATGTGCCTTTTGCCATTGCGGACGCAACTGCTCTGACTGAAGCTGGTTATGTCGGGGAAGATGTTGAAAATATC
CTCCTCAAGCTTTTGCAGGCGGCTGACTTTAATATTGAACGTGCAGAACGCGGCATTATCTATGTTGATGAGATTGACAA
GATTGCTAAGAAAGGCGAGAACGTCTCTATTACTCGTGATGTTTCGGGTGAAGGAGTTCAGCAAGCTCTCTTGAAGATTA
TCGAAGGAACAGTAGCTAGTGTACCGCCGCAAGGTGGACGCAAGCATCCGCAGCAGGAAATGATTCAGGTTGATACCAAG
AATATTCTCTTCATTGTTGGCGGTGCTTTTGACGGTATCGAAGAAATTGTAAAACAGCGCTTGGGCGAGAAAATCATTGG
TTTCGGTCAGAATAACCGAGCAATTGACGAAGATGGGTCCTATATGCAGGAAATTATCTCAGAAGACGTTCAAAAATTTG
GAATTATTCCTGAGTTGATTGGCCGTTTACCTGTCTTTGCTGCGCTTGAGCAGCTGACGGTTGATGATTTGGTTCGGATT
TTGAAAGAGCCTAGAAACGCCCTTATTAAGCAGTATCAGGCACTCTTGTCCTATGATGATGTGAAGCTTGAATTTGACGA
AGATGCTCTGCAGGAGATTGCTAATAAAGCGATTGAACGTAAAACTGGTGCGCGCGGTCTTCGCTCTATCATTGAAGAAA
CTATGATGGATGTCATGTTTGAAGTTCCGAGTCAGGAAAATGTCAAACTTGTCCGCATTACCAAAGAAGCAGTAGATGGA
ACAGATAAGCCTATTCTAGAAACTGCCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpX | Streptococcus mutans UA159 |
85.575 |
100 |
0.856 |
| clpX | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
57.606 |
98.044 |
0.565 |