Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   FGL66_RS06665 Genome accession   NZ_CP040781
Coordinates   1358585..1359628 (-) Length   347 a.a.
NCBI ID   WP_180809069.1    Uniprot ID   A0A7H9DLT0
Organism   Staphylococcus sp. 17KM0847     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1353585..1364628
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL66_RS06635 (FGL66_06595) - 1354522..1354728 (-) 207 WP_180809063.1 DUF1128 domain-containing protein -
  FGL66_RS06640 (FGL66_06600) - 1354862..1355317 (+) 456 WP_180809064.1 low molecular weight protein-tyrosine-phosphatase -
  FGL66_RS06645 (FGL66_06605) - 1355324..1355614 (+) 291 WP_180809065.1 YtxH domain-containing protein -
  FGL66_RS06650 (FGL66_06610) - 1355870..1357132 (+) 1263 WP_180809066.1 YihY/virulence factor BrkB family protein -
  FGL66_RS06655 (FGL66_06615) - 1357338..1357910 (+) 573 WP_180809067.1 carbonic anhydrase -
  FGL66_RS06660 (FGL66_06620) vraR 1357966..1358595 (-) 630 WP_180809068.1 response regulator transcription factor Regulator
  FGL66_RS06665 (FGL66_06625) vraS 1358585..1359628 (-) 1044 WP_180809069.1 sensor histidine kinase Regulator
  FGL66_RS06670 (FGL66_06630) liaF 1359625..1360326 (-) 702 WP_180809070.1 cell wall-active antibiotics response protein LiaF -
  FGL66_RS06675 (FGL66_06635) - 1360339..1360728 (-) 390 WP_180809071.1 hypothetical protein -
  FGL66_RS06680 (FGL66_06640) map 1360827..1361588 (-) 762 WP_180809072.1 type I methionyl aminopeptidase -
  FGL66_RS06685 (FGL66_06645) - 1361684..1362691 (+) 1008 WP_180809073.1 aromatic acid exporter family protein -
  FGL66_RS06690 (FGL66_06650) - 1362964..1363362 (+) 399 WP_180809074.1 lactococcin 972 family bacteriocin -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40091.33 Da        Isoelectric Point: 5.2712

>NTDB_id=367101 FGL66_RS06665 WP_180809069.1 1358585..1359628(-) (vraS) [Staphylococcus sp. 17KM0847]
MNHYFRTIGAMLILVYAMFTAFFFIDKVFVNIIFFQGMFYKQIFGVPVFLFINLLVVFLCILVGSVIAYKINQQYDWLQE
QIERAIEGETVGINDHQIELYHETIALYQTLVPLNQELHKLRIKTQNLTNEQYNMNDLKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEAPLNQQIPTLEKMIQDSQLEMRALLLHLRPIGLNDRTLGEGIESLVTDLQRKVPMKVIYEI
DAFEVPKGIEDHLFRITQEAISNTLRHANGTQVSVELLNREGYLLLRIQDDGVGFNVDDKIEQSYGLKNMRERATEIGAT
FHIVSLPDSGTRIEVKAPLDKEGHYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=367101 FGL66_RS06665 WP_180809069.1 1358585..1359628(-) (vraS) [Staphylococcus sp. 17KM0847]
ATGAATCACTATTTTCGTACAATTGGCGCGATGTTAATACTTGTTTATGCGATGTTTACAGCTTTTTTCTTTATAGATAA
AGTTTTTGTTAATATTATTTTCTTTCAAGGGATGTTTTATAAGCAAATTTTTGGTGTGCCTGTATTTTTGTTTATTAATT
TACTTGTCGTTTTTTTGTGTATTCTTGTAGGAAGTGTAATTGCTTATAAAATTAATCAACAATATGATTGGTTACAAGAG
CAAATTGAACGTGCTATCGAAGGTGAGACGGTAGGTATTAATGATCACCAAATCGAACTATACCATGAAACCATTGCTTT
ATATCAAACACTAGTACCATTAAATCAAGAGCTGCATAAACTTCGTATCAAAACACAAAATTTAACAAATGAACAATATA
ATATGAATGATTTGAAAGTGAAAAAAATTATTGAAGATGAACGTCAACGTTTGGCACGAGAGTTACATGATAGTGTATCT
CAACAGTTATTTGCGGCAAGTATGATGTTATCTGCAATTAAAGAAACCAAGTTAGAAGCACCTTTGAATCAGCAAATACC
GACATTGGAGAAGATGATTCAAGATTCTCAATTAGAAATGCGTGCGTTATTATTGCATTTGAGACCGATTGGTTTAAATG
ATAGGACACTAGGTGAAGGGATTGAATCATTGGTTACAGATCTCCAACGTAAAGTGCCGATGAAAGTCATATATGAAATT
GATGCATTCGAAGTGCCCAAAGGGATTGAAGATCATTTATTCCGTATCACACAAGAAGCCATTTCAAATACGTTGAGACA
TGCTAATGGTACACAAGTCAGTGTAGAATTATTAAATAGAGAAGGGTATTTATTATTGCGTATTCAAGATGACGGTGTAG
GTTTTAATGTAGATGATAAGATAGAACAGAGTTATGGTTTGAAAAATATGAGAGAGCGGGCCACAGAAATTGGTGCCACT
TTTCATATCGTATCACTACCTGACTCTGGCACACGTATTGAAGTAAAGGCACCTTTAGATAAGGAGGGACATTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7H9DLT0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

81.268

100

0.813


Multiple sequence alignment