Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   FED49_RS07210 Genome accession   NZ_CP040747
Coordinates   1378726..1379307 (+) Length   193 a.a.
NCBI ID   WP_007498648.1    Uniprot ID   -
Organism   Bacillus altitudinis strain HQ-51-Ba     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1373726..1384307
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FED49_RS07185 - 1374391..1375569 (+) 1179 WP_046527697.1 N-acetyldiaminopimelate deacetylase -
  FED49_RS07190 - 1375620..1375862 (+) 243 WP_003211408.1 YkuS family protein -
  FED49_RS07195 - 1375887..1376696 (-) 810 WP_017359416.1 mechanosensitive ion channel family protein -
  FED49_RS07200 ahpA 1376968..1377510 (+) 543 WP_007498654.1 biofilm-specific peroxidase AhpA -
  FED49_RS07205 - 1377786..1378244 (+) 459 WP_008345174.1 TlpA disulfide reductase family protein -
  FED49_RS07210 rok 1378726..1379307 (+) 582 WP_007498648.1 hypothetical protein Regulator
  FED49_RS07215 - 1379370..1380287 (-) 918 WP_138825678.1 sigmaE regulated sporulation protein -
  FED49_RS07220 - 1380371..1380952 (+) 582 WP_017359414.1 molybdenum cofactor guanylyltransferase -
  FED49_RS07225 - 1380982..1381998 (+) 1017 WP_041092414.1 MoeB/ThiF family adenylyltransferase -
  FED49_RS07230 glp 1382008..1383282 (+) 1275 WP_048001602.1 gephyrin-like molybdotransferase Glp -
  FED49_RS07235 mobB 1383264..1383791 (+) 528 WP_138825680.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  FED49_RS07240 - 1383784..1384275 (+) 492 WP_008345161.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21861.83 Da        Isoelectric Point: 9.7309

>NTDB_id=366940 FED49_RS07210 WP_007498648.1 1378726..1379307(+) (rok) [Bacillus altitudinis strain HQ-51-Ba]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVTDTKKEVRTERKTDSLPVLAELAAQEMRSYNQ
PAQTQSNVTSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=366940 FED49_RS07210 WP_007498648.1 1378726..1379307(+) (rok) [Bacillus altitudinis strain HQ-51-Ba]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAATGAAGCAGAAGTAAAGGTTATCCGTGAATATCA
AATTGAACGAGATGCGATTTACGCAAAACTAAGAGAATTAGACCGTCAAGGTACAGGTCTCGTCACAGATACAAAAAAAG
AAGTACGTACAGAGAGAAAAACAGATTCACTGCCTGTATTAGCTGAGCTGGCTGCACAAGAAATGAGAAGCTACAATCAG
CCTGCGCAAACGCAGTCAAACGTTACATCATCTTTAGGAACAGGTCAGCTAAATGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTAGACCTGGATCAAAGGCAGCTAAGCTTCGTGAAGCTGCAATCAAAACATTAA
AGCGTCATAATGCGGCGATTAAAAGCTCTGAACTTCAAAAAGAGATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCAGAAGTGAAGAAACCTTATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

79.474

98.446

0.782

Multiple sequence alignment