Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | FGY92_RS05965 | Genome accession | NZ_CP040732 |
| Coordinates | 1195914..1196888 (+) | Length | 324 a.a. |
| NCBI ID | WP_049415532.1 | Uniprot ID | - |
| Organism | Staphylococcus hominis strain S34-1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1190914..1201888
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGY92_RS05935 (FGY92_06005) | - | 1191733..1192284 (+) | 552 | WP_017176231.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| FGY92_RS05940 (FGY92_06010) | - | 1192284..1193741 (+) | 1458 | WP_101804135.1 | rhomboid family protein | - |
| FGY92_RS05945 (FGY92_06015) | - | 1193725..1193928 (+) | 204 | WP_017176233.1 | YqgQ family protein | - |
| FGY92_RS05950 (FGY92_06020) | - | 1193925..1194911 (+) | 987 | WP_002449785.1 | ROK family glucokinase | - |
| FGY92_RS05955 (FGY92_06025) | - | 1194911..1195234 (+) | 324 | WP_017176234.1 | MTH1187 family thiamine-binding protein | - |
| FGY92_RS05960 (FGY92_06030) | - | 1195236..1195862 (+) | 627 | WP_017176235.1 | MBL fold metallo-hydrolase | - |
| FGY92_RS05965 (FGY92_06035) | comGA | 1195914..1196888 (+) | 975 | WP_049415532.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| FGY92_RS05970 (FGY92_06040) | comGB | 1196866..1197924 (+) | 1059 | WP_048681721.1 | competence type IV pilus assembly protein ComGB | - |
| FGY92_RS05975 (FGY92_06045) | comGC | 1197944..1198255 (+) | 312 | WP_017176238.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| FGY92_RS05980 (FGY92_06050) | comGD | 1198245..1198679 (+) | 435 | WP_049382010.1 | competence type IV pilus minor pilin ComGD | - |
| FGY92_RS05985 (FGY92_06055) | - | 1198871..1199368 (+) | 498 | WP_017176240.1 | competence protein ComG | - |
| FGY92_RS05990 (FGY92_06065) | - | 1199533..1200042 (+) | 510 | WP_235063067.1 | shikimate kinase | - |
| FGY92_RS05995 (FGY92_06070) | gcvT | 1200237..1201328 (+) | 1092 | WP_017176243.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36880.87 Da Isoelectric Point: 8.4444
>NTDB_id=366833 FGY92_RS05965 WP_049415532.1 1195914..1196888(+) (comGA) [Staphylococcus hominis strain S34-1]
MKLLFQEIINKAISKNASDVHFIPSEDKVHIKFRVNDILETYEMFSNDIYEKLLIYMKFKANLDVSTHQIAQSGRYTYHA
KSIFYLRISTLPLSLGIESCVIRLIPQYFTSKREYKDFNDFKSLMNKKQGLILLTGPTGSGKSTLMYQLVLYAFQELNLN
VITIENPVEQLLKGITQVSVNHKAGIDYVSSFKAILRCDPDVILIGEIRDAEVAKCVIQASLSGHLVLTTMHSSNCKGAI
LRLLEMGISVQEISQAINVISNQRLVTTTSNQRKLVCESITNNQIQYFFEHNHTLPKTFNNLKEKLLSLSKEGLICEDVV
EKYI
MKLLFQEIINKAISKNASDVHFIPSEDKVHIKFRVNDILETYEMFSNDIYEKLLIYMKFKANLDVSTHQIAQSGRYTYHA
KSIFYLRISTLPLSLGIESCVIRLIPQYFTSKREYKDFNDFKSLMNKKQGLILLTGPTGSGKSTLMYQLVLYAFQELNLN
VITIENPVEQLLKGITQVSVNHKAGIDYVSSFKAILRCDPDVILIGEIRDAEVAKCVIQASLSGHLVLTTMHSSNCKGAI
LRLLEMGISVQEISQAINVISNQRLVTTTSNQRKLVCESITNNQIQYFFEHNHTLPKTFNNLKEKLLSLSKEGLICEDVV
EKYI
Nucleotide
Download Length: 975 bp
>NTDB_id=366833 FGY92_RS05965 WP_049415532.1 1195914..1196888(+) (comGA) [Staphylococcus hominis strain S34-1]
TTGAAATTATTATTTCAAGAAATAATTAATAAAGCAATTTCAAAAAATGCAAGTGACGTACACTTTATTCCTTCAGAGGA
TAAAGTACATATTAAATTCAGAGTGAATGATATATTAGAGACATATGAAATGTTTAGTAATGACATTTATGAAAAATTAT
TAATTTATATGAAATTTAAAGCAAATTTAGATGTATCAACACATCAAATAGCTCAAAGTGGTAGATATACTTATCATGCT
AAATCAATATTTTATTTAAGAATTTCTACTTTACCTTTGTCATTAGGAATAGAAAGTTGTGTTATTAGACTTATCCCTCA
ATATTTCACTTCTAAAAGAGAGTATAAGGACTTTAATGACTTTAAATCTCTAATGAATAAAAAGCAAGGTCTCATTTTAC
TTACTGGTCCAACAGGTTCAGGTAAAAGTACTTTGATGTATCAATTAGTACTCTATGCTTTTCAAGAATTAAATTTAAAT
GTTATTACAATTGAAAATCCTGTTGAACAATTATTAAAAGGCATAACACAAGTGTCAGTAAATCATAAAGCCGGTATAGA
TTATGTTAGTTCATTTAAAGCAATATTAAGATGTGATCCAGATGTTATTTTAATTGGTGAAATTAGAGATGCTGAAGTGG
CAAAATGTGTTATTCAAGCAAGTTTAAGTGGTCATTTAGTGCTCACTACTATGCATTCAAGCAATTGTAAGGGCGCAATA
CTCAGATTGTTAGAGATGGGGATTAGTGTTCAAGAAATTTCACAAGCAATAAATGTTATTTCAAATCAAAGATTAGTTAC
AACTACTTCAAATCAAAGAAAGCTTGTTTGTGAGTCTATTACAAATAATCAAATTCAATATTTTTTTGAACATAACCATA
CGCTTCCTAAGACATTTAATAATTTAAAAGAAAAATTGTTATCGCTATCGAAAGAAGGTCTTATATGTGAAGATGTGGTT
GAAAAATATATTTAA
TTGAAATTATTATTTCAAGAAATAATTAATAAAGCAATTTCAAAAAATGCAAGTGACGTACACTTTATTCCTTCAGAGGA
TAAAGTACATATTAAATTCAGAGTGAATGATATATTAGAGACATATGAAATGTTTAGTAATGACATTTATGAAAAATTAT
TAATTTATATGAAATTTAAAGCAAATTTAGATGTATCAACACATCAAATAGCTCAAAGTGGTAGATATACTTATCATGCT
AAATCAATATTTTATTTAAGAATTTCTACTTTACCTTTGTCATTAGGAATAGAAAGTTGTGTTATTAGACTTATCCCTCA
ATATTTCACTTCTAAAAGAGAGTATAAGGACTTTAATGACTTTAAATCTCTAATGAATAAAAAGCAAGGTCTCATTTTAC
TTACTGGTCCAACAGGTTCAGGTAAAAGTACTTTGATGTATCAATTAGTACTCTATGCTTTTCAAGAATTAAATTTAAAT
GTTATTACAATTGAAAATCCTGTTGAACAATTATTAAAAGGCATAACACAAGTGTCAGTAAATCATAAAGCCGGTATAGA
TTATGTTAGTTCATTTAAAGCAATATTAAGATGTGATCCAGATGTTATTTTAATTGGTGAAATTAGAGATGCTGAAGTGG
CAAAATGTGTTATTCAAGCAAGTTTAAGTGGTCATTTAGTGCTCACTACTATGCATTCAAGCAATTGTAAGGGCGCAATA
CTCAGATTGTTAGAGATGGGGATTAGTGTTCAAGAAATTTCACAAGCAATAAATGTTATTTCAAATCAAAGATTAGTTAC
AACTACTTCAAATCAAAGAAAGCTTGTTTGTGAGTCTATTACAAATAATCAAATTCAATATTTTTTTGAACATAACCATA
CGCTTCCTAAGACATTTAATAATTTAAAAGAAAAATTGTTATCGCTATCGAAAGAAGGTCTTATATGTGAAGATGTGGTT
GAAAAATATATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
69.136 |
100 |
0.691 |
| comGA | Staphylococcus aureus N315 |
69.136 |
100 |
0.691 |