Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   FGY92_RS01520 Genome accession   NZ_CP040732
Coordinates   305294..306190 (+) Length   298 a.a.
NCBI ID   WP_002449490.1    Uniprot ID   -
Organism   Staphylococcus hominis strain S34-1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 300294..311190
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGY92_RS01495 (FGY92_01495) - 301189..302133 (+) 945 WP_235063283.1 LCP family protein -
  FGY92_RS01500 (FGY92_01500) - 302245..303720 (-) 1476 WP_235063284.1 alkaline phosphatase -
  FGY92_RS01505 - 304101..304274 (+) 174 WP_176744383.1 hypothetical protein -
  FGY92_RS01510 - 304443..304610 (+) 168 WP_176743757.1 hypothetical protein -
  FGY92_RS01515 (FGY92_01505) braR 304623..305288 (+) 666 WP_235063285.1 response regulator transcription factor Regulator
  FGY92_RS01520 (FGY92_01510) braS 305294..306190 (+) 897 WP_002449490.1 sensor histidine kinase Regulator
  FGY92_RS01525 (FGY92_01515) - 306322..307071 (+) 750 WP_002449305.1 ABC transporter ATP-binding protein -
  FGY92_RS01530 (FGY92_01520) - 307073..309022 (+) 1950 WP_133944956.1 FtsX-like permease family protein -
  FGY92_RS01535 (FGY92_01525) - 309110..309874 (+) 765 WP_235063286.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34648.26 Da        Isoelectric Point: 6.6353

>NTDB_id=366817 FGY92_RS01520 WP_002449490.1 305294..306190(+) (braS) [Staphylococcus hominis strain S34-1]
MLKAFIKSIRHQIMIVALFLLLFLMIFFLFNLPFNAFFLGMAIILFIMIIFWLIQLSGFQEAVSLKEEVADLEDELQRVK
NEQAAYQVNVENYFLTWVHQMKTPITASKLLLERNEDNVVNRVRQEIIQIDNYTSLALSYLKLMNQETDMSFSKVTINDL
VKPLIMKYSIQFIDQKTTIHYTRCEDEVLTDVQWCTIMIEQILNNALKYARGKDIWITFNNENHVLSIRDNGVGISKADL
PKIFDKGYSGYNGRLHQHSSGIGLFIVKHISAHLHHKVEVSSTLHEGTTFDIHFPENN

Nucleotide


Download         Length: 897 bp        

>NTDB_id=366817 FGY92_RS01520 WP_002449490.1 305294..306190(+) (braS) [Staphylococcus hominis strain S34-1]
ATGTTAAAAGCGTTTATAAAATCGATACGTCATCAAATTATGATAGTAGCTTTATTTCTATTACTTTTCTTGATGATTTT
CTTTCTTTTTAATTTGCCTTTCAATGCCTTCTTTCTAGGTATGGCAATTATTCTTTTCATAATGATTATTTTTTGGTTGA
TTCAACTTAGTGGATTTCAAGAAGCCGTGTCTTTAAAAGAAGAAGTTGCTGACTTAGAAGATGAATTACAACGTGTAAAA
AATGAACAAGCTGCATACCAAGTCAATGTTGAGAACTATTTTTTAACATGGGTGCATCAAATGAAAACACCTATTACCGC
TTCAAAACTCCTTCTAGAAAGAAATGAAGATAATGTAGTAAATCGTGTGCGTCAAGAAATTATACAAATTGATAACTATA
CAAGTCTTGCACTCAGCTATTTAAAATTGATGAATCAAGAAACGGATATGTCCTTTTCAAAAGTGACCATTAACGATCTC
GTTAAACCGCTTATTATGAAATATTCGATTCAATTCATCGATCAAAAAACAACTATTCATTACACACGTTGTGAAGATGA
AGTACTGACTGATGTTCAATGGTGTACGATCATGATAGAACAAATTCTTAATAATGCTTTGAAATATGCAAGAGGTAAAG
ATATTTGGATTACGTTTAACAACGAAAATCATGTGCTATCTATACGAGATAACGGTGTAGGAATTAGTAAAGCCGATCTT
CCCAAAATTTTCGATAAAGGGTACTCAGGCTATAACGGAAGACTTCATCAACATTCAAGTGGCATCGGATTATTTATTGT
TAAACATATATCGGCACATTTACATCATAAAGTAGAAGTATCTTCAACGCTCCATGAAGGAACTACATTTGACATACATT
TCCCAGAAAATAATTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(195-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

60.068

98.322

0.591

Multiple sequence alignment