Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   FGY92_RS01515 Genome accession   NZ_CP040732
Coordinates   304623..305288 (+) Length   221 a.a.
NCBI ID   WP_235063285.1    Uniprot ID   -
Organism   Staphylococcus hominis strain S34-1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 299623..310288
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGY92_RS01490 (FGY92_01490) - 300043..301173 (+) 1131 WP_328230337.1 DegT/DnrJ/EryC1/StrS family aminotransferase -
  FGY92_RS01495 (FGY92_01495) - 301189..302133 (+) 945 WP_235063283.1 LCP family protein -
  FGY92_RS01500 (FGY92_01500) - 302245..303720 (-) 1476 WP_235063284.1 alkaline phosphatase -
  FGY92_RS01505 - 304101..304274 (+) 174 WP_176744383.1 hypothetical protein -
  FGY92_RS01510 - 304443..304610 (+) 168 WP_176743757.1 hypothetical protein -
  FGY92_RS01515 (FGY92_01505) braR 304623..305288 (+) 666 WP_235063285.1 response regulator transcription factor Regulator
  FGY92_RS01520 (FGY92_01510) braS 305294..306190 (+) 897 WP_002449490.1 sensor histidine kinase Regulator
  FGY92_RS01525 (FGY92_01515) - 306322..307071 (+) 750 WP_002449305.1 ABC transporter ATP-binding protein -
  FGY92_RS01530 (FGY92_01520) - 307073..309022 (+) 1950 WP_133944956.1 FtsX-like permease family protein -
  FGY92_RS01535 (FGY92_01525) - 309110..309874 (+) 765 WP_235063286.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25486.24 Da        Isoelectric Point: 4.5773

>NTDB_id=366816 FGY92_RS01515 WP_235063285.1 304623..305288(+) (braR) [Staphylococcus hominis strain S34-1]
MKVLIVEDDVVIAESLGNELSHWNYEVSITKQFDNILEEFKTAEPELVLLDINLPTFNGYHWCQEIRKVSNVPIIFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLTVSNNEMTVKGCKLVVDEATLYYNNDSVQLSFTELQILN
KLFQNEGKYVNRTAIIEKCWESENFIDDNTLAVNMTRLRKKLQSIGIVDFIETKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=366816 FGY92_RS01515 WP_235063285.1 304623..305288(+) (braR) [Staphylococcus hominis strain S34-1]
ATGAAAGTATTGATTGTCGAAGATGATGTCGTCATTGCAGAAAGTCTAGGGAATGAACTCTCACATTGGAACTATGAAGT
GAGTATTACTAAGCAGTTTGATAATATTCTTGAAGAATTTAAAACTGCAGAACCTGAACTTGTGTTATTAGATATTAATT
TACCTACATTTAATGGTTATCATTGGTGCCAAGAGATACGTAAAGTATCTAATGTCCCAATTATTTTCATTAGTTCGCGT
ACTGACAATATGGATCAAATTATGGCAATTCAAATGGGCGGAGATGACTTTATTGAAAAGCCATTTAATTTGTCACTTAC
TATAGCGAAAATTCAAGCATTGCTACGTAGAACATATGATTTAACGGTTTCAAATAATGAGATGACTGTTAAAGGGTGTA
AGCTCGTTGTTGATGAAGCCACACTATACTACAACAATGACTCTGTACAACTTTCGTTTACTGAACTACAAATTTTGAAT
AAATTATTTCAAAATGAAGGGAAGTATGTCAATCGTACAGCAATTATTGAAAAATGTTGGGAATCAGAGAATTTTATTGA
TGATAATACGTTAGCAGTAAATATGACACGTCTACGTAAAAAGCTGCAATCTATCGGTATTGTTGATTTCATTGAGACAA
AGAAAAATGTAGGGTATAAGGTGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

77.376

100

0.774

Multiple sequence alignment