Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   FF090_RS14740 Genome accession   NZ_CP040709
Coordinates   3119459..3119839 (-) Length   126 a.a.
NCBI ID   WP_138857440.1    Uniprot ID   A0A840S4R0
Organism   Inhella inkyongensis strain IMCC1713     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3114459..3124839
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FF090_RS14725 - 3116260..3118521 (-) 2262 WP_138857437.1 methyl-accepting chemotaxis protein -
  FF090_RS14730 - 3118566..3119081 (-) 516 WP_138857438.1 chemotaxis protein CheW -
  FF090_RS14735 - 3119086..3119451 (-) 366 WP_138857439.1 PleD family two-component system response regulator -
  FF090_RS14740 pilG 3119459..3119839 (-) 381 WP_138857440.1 PleD family two-component system response regulator Regulator
  FF090_RS14745 - 3119886..3120038 (-) 153 WP_138858410.1 rubredoxin -
  FF090_RS14750 - 3120255..3121187 (+) 933 WP_138857441.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  FF090_RS14755 hemL 3121238..3122524 (+) 1287 WP_138857442.1 glutamate-1-semialdehyde 2,1-aminomutase -
  FF090_RS14760 mpl 3122572..3123936 (+) 1365 WP_138857443.1 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase -
  FF090_RS14765 - 3124069..3124677 (-) 609 WP_175423676.1 chalcone isomerase family protein -

Sequence

Protein


Download         Length: 126 a.a.        Molecular weight: 13945.08 Da        Isoelectric Point: 5.7125

>NTDB_id=366714 FF090_RS14740 WP_138857440.1 3119459..3119839(-) (pilG) [Inhella inkyongensis strain IMCC1713]
MSVAEKALNVLVIDDSNTIRRSAEIFLKQGGHSVVLAEDGFDALAKLSDFKPDLVFCDILMPRLDGYQTCAIIKRNAEFA
DVPVIMLSSKDGLFDKARGRMVGSQDYLTKPFTKDQLLQAVQQHSP

Nucleotide


Download         Length: 381 bp        

>NTDB_id=366714 FF090_RS14740 WP_138857440.1 3119459..3119839(-) (pilG) [Inhella inkyongensis strain IMCC1713]
ATGTCGGTTGCAGAGAAGGCCCTGAACGTGCTGGTCATCGACGACAGCAACACGATTCGCCGCAGCGCGGAAATATTTCT
CAAACAAGGCGGCCACTCGGTGGTGTTGGCCGAGGACGGCTTTGATGCGCTGGCGAAACTCAGCGACTTCAAGCCCGACC
TGGTTTTTTGCGACATCTTGATGCCGCGTCTGGATGGTTATCAGACCTGCGCCATCATCAAACGCAATGCCGAATTCGCC
GATGTGCCAGTCATCATGCTGTCCAGCAAGGATGGCTTGTTTGACAAGGCGCGAGGCCGAATGGTGGGGTCGCAGGATTA
CCTGACCAAGCCCTTCACGAAAGACCAATTGCTGCAGGCGGTGCAGCAGCACAGCCCGTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A840S4R0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

60.484

98.413

0.595
  pilH Synechocystis sp. PCC 6803

42.982

90.476

0.389

Multiple sequence alignment