Detailed information
Bioinformatically predicted
Overview
| Name | radA | Type | Machinery gene |
| Locus tag | FGE20_RS03255 | Genome accession | NZ_CP040694 |
| Coordinates | 738545..739891 (+) | Length | 448 a.a. |
| NCBI ID | WP_138981709.1 | Uniprot ID | A0A5B7UFX8 |
| Organism | Elizabethkingia sp. JS20170427COW | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 733545..744891
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGE20_RS03245 (FGE20_03245) | yidC | 734919..736712 (-) | 1794 | WP_138981707.1 | membrane protein insertase YidC | - |
| FGE20_RS03250 (FGE20_03250) | - | 736720..738339 (-) | 1620 | WP_138981708.1 | CTP synthase | - |
| FGE20_RS03255 (FGE20_03255) | radA | 738545..739891 (+) | 1347 | WP_138981709.1 | DNA repair protein RadA | Machinery gene |
| FGE20_RS03260 (FGE20_03260) | - | 739895..740476 (+) | 582 | WP_138981710.1 | ACP phosphodiesterase | - |
| FGE20_RS03265 (FGE20_03265) | - | 740489..741478 (-) | 990 | WP_138981711.1 | hypothetical protein | - |
| FGE20_RS03270 (FGE20_03270) | htpG | 741642..743531 (-) | 1890 | WP_138981712.1 | molecular chaperone HtpG | - |
| FGE20_RS03275 (FGE20_03275) | recA | 743640..744647 (-) | 1008 | WP_138981713.1 | recombinase RecA | Machinery gene |
Sequence
Protein
Download Length: 448 a.a. Molecular weight: 49733.33 Da Isoelectric Point: 7.1549
>NTDB_id=366555 FGE20_RS03255 WP_138981709.1 738545..739891(+) (radA) [Elizabethkingia sp. JS20170427COW]
MAKLKTVYFCQNCGTQHPQWMGQCKNCGQWNTLVEEVVEKTTSKNYSGDSKQHIINIVEVNAQEEPRIKTPSEELNRVLG
GGIVLGSVTLIGGEPGIGKSTLLLQLALKMRKKIFYVSGEESASQIKMRADRLTDLQNPECFLYTETSIEKILHEARKLK
PDFMIIDSIQTLHSQAMESSPGTVSQIRECSSEVIKFAKATSTPVFLVGHITKDGQIAGPKVLEHMVDVVLNFDGDRNHL
FRLLRANKNRFGSTSEIGIYEMISQGLKEIKNPSEILITKKFEELSGNSVAVTLEGNRPMLLEIQALVSTAVYGTPQRSC
TGFDAKRLNMLLAVLEKRAGFQLGAKDVFLNITGGIKTDDPALDLAVVASILSSNDDLAISEKFCFAGEIGLSGEIRPVP
QIEHRITEAEKLGYDKIFVSNLNKIPKRKYGIKIEEVSKIEDFHDRLF
MAKLKTVYFCQNCGTQHPQWMGQCKNCGQWNTLVEEVVEKTTSKNYSGDSKQHIINIVEVNAQEEPRIKTPSEELNRVLG
GGIVLGSVTLIGGEPGIGKSTLLLQLALKMRKKIFYVSGEESASQIKMRADRLTDLQNPECFLYTETSIEKILHEARKLK
PDFMIIDSIQTLHSQAMESSPGTVSQIRECSSEVIKFAKATSTPVFLVGHITKDGQIAGPKVLEHMVDVVLNFDGDRNHL
FRLLRANKNRFGSTSEIGIYEMISQGLKEIKNPSEILITKKFEELSGNSVAVTLEGNRPMLLEIQALVSTAVYGTPQRSC
TGFDAKRLNMLLAVLEKRAGFQLGAKDVFLNITGGIKTDDPALDLAVVASILSSNDDLAISEKFCFAGEIGLSGEIRPVP
QIEHRITEAEKLGYDKIFVSNLNKIPKRKYGIKIEEVSKIEDFHDRLF
Nucleotide
Download Length: 1347 bp
>NTDB_id=366555 FGE20_RS03255 WP_138981709.1 738545..739891(+) (radA) [Elizabethkingia sp. JS20170427COW]
GTGGCTAAGTTAAAAACTGTATATTTTTGTCAGAATTGTGGAACCCAACATCCCCAATGGATGGGACAATGCAAAAACTG
CGGGCAATGGAACACCTTAGTAGAGGAAGTGGTAGAAAAAACTACCTCTAAAAACTACTCTGGGGACAGCAAACAACACA
TCATTAATATTGTTGAAGTAAACGCCCAAGAAGAACCTAGGATAAAAACCCCAAGCGAAGAGCTCAATCGCGTGTTAGGA
GGTGGTATTGTCCTAGGATCGGTTACTTTAATTGGAGGCGAACCTGGAATTGGTAAATCTACCCTGCTCTTACAGCTAGC
CTTAAAGATGAGAAAAAAAATATTCTATGTTTCTGGTGAAGAAAGTGCCTCCCAAATCAAGATGAGAGCCGACCGATTAA
CCGATTTGCAAAACCCTGAATGTTTTCTCTATACCGAAACTTCCATCGAAAAAATTCTGCATGAAGCGAGGAAATTAAAA
CCCGACTTCATGATTATAGACTCCATACAAACCTTGCATTCCCAAGCTATGGAGAGCTCCCCAGGTACCGTTTCTCAGAT
TCGGGAATGCTCCTCGGAGGTTATTAAATTTGCAAAAGCTACTAGCACCCCTGTATTTTTGGTAGGACACATCACTAAAG
ATGGACAAATTGCAGGCCCTAAAGTTTTAGAGCATATGGTAGATGTAGTCCTCAACTTCGATGGAGACAGAAATCATCTA
TTCCGATTATTAAGAGCCAACAAAAACAGATTTGGTTCTACTTCAGAAATTGGAATTTATGAAATGATTTCCCAAGGTTT
AAAAGAAATAAAAAATCCTTCAGAAATCTTAATCACCAAAAAATTTGAAGAACTTTCCGGCAACTCCGTAGCTGTAACTT
TAGAAGGAAACCGCCCTATGTTGCTAGAAATACAAGCCTTAGTAAGCACTGCTGTGTACGGAACTCCACAAAGGAGCTGT
ACCGGTTTTGATGCCAAAAGGCTCAACATGCTTTTAGCAGTGCTCGAAAAAAGAGCAGGCTTCCAGCTAGGAGCCAAGGA
TGTTTTCCTCAACATTACAGGAGGGATAAAAACCGACGATCCTGCACTAGATTTAGCCGTAGTAGCTTCTATCCTTTCAT
CGAACGATGATTTGGCAATTTCAGAGAAGTTCTGTTTTGCTGGAGAAATAGGCTTAAGTGGAGAGATAAGACCTGTCCCT
CAAATAGAACACCGAATTACAGAAGCCGAAAAATTAGGCTATGACAAGATTTTCGTCTCTAACCTCAATAAAATTCCGAA
ACGGAAATATGGAATTAAAATTGAAGAAGTTAGTAAAATTGAAGACTTCCATGATCGCTTATTCTAA
GTGGCTAAGTTAAAAACTGTATATTTTTGTCAGAATTGTGGAACCCAACATCCCCAATGGATGGGACAATGCAAAAACTG
CGGGCAATGGAACACCTTAGTAGAGGAAGTGGTAGAAAAAACTACCTCTAAAAACTACTCTGGGGACAGCAAACAACACA
TCATTAATATTGTTGAAGTAAACGCCCAAGAAGAACCTAGGATAAAAACCCCAAGCGAAGAGCTCAATCGCGTGTTAGGA
GGTGGTATTGTCCTAGGATCGGTTACTTTAATTGGAGGCGAACCTGGAATTGGTAAATCTACCCTGCTCTTACAGCTAGC
CTTAAAGATGAGAAAAAAAATATTCTATGTTTCTGGTGAAGAAAGTGCCTCCCAAATCAAGATGAGAGCCGACCGATTAA
CCGATTTGCAAAACCCTGAATGTTTTCTCTATACCGAAACTTCCATCGAAAAAATTCTGCATGAAGCGAGGAAATTAAAA
CCCGACTTCATGATTATAGACTCCATACAAACCTTGCATTCCCAAGCTATGGAGAGCTCCCCAGGTACCGTTTCTCAGAT
TCGGGAATGCTCCTCGGAGGTTATTAAATTTGCAAAAGCTACTAGCACCCCTGTATTTTTGGTAGGACACATCACTAAAG
ATGGACAAATTGCAGGCCCTAAAGTTTTAGAGCATATGGTAGATGTAGTCCTCAACTTCGATGGAGACAGAAATCATCTA
TTCCGATTATTAAGAGCCAACAAAAACAGATTTGGTTCTACTTCAGAAATTGGAATTTATGAAATGATTTCCCAAGGTTT
AAAAGAAATAAAAAATCCTTCAGAAATCTTAATCACCAAAAAATTTGAAGAACTTTCCGGCAACTCCGTAGCTGTAACTT
TAGAAGGAAACCGCCCTATGTTGCTAGAAATACAAGCCTTAGTAAGCACTGCTGTGTACGGAACTCCACAAAGGAGCTGT
ACCGGTTTTGATGCCAAAAGGCTCAACATGCTTTTAGCAGTGCTCGAAAAAAGAGCAGGCTTCCAGCTAGGAGCCAAGGA
TGTTTTCCTCAACATTACAGGAGGGATAAAAACCGACGATCCTGCACTAGATTTAGCCGTAGTAGCTTCTATCCTTTCAT
CGAACGATGATTTGGCAATTTCAGAGAAGTTCTGTTTTGCTGGAGAAATAGGCTTAAGTGGAGAGATAAGACCTGTCCCT
CAAATAGAACACCGAATTACAGAAGCCGAAAAATTAGGCTATGACAAGATTTTCGTCTCTAACCTCAATAAAATTCCGAA
ACGGAAATATGGAATTAAAATTGAAGAAGTTAGTAAAATTGAAGACTTCCATGATCGCTTATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| radA | Streptococcus pneumoniae R6 |
48.14 |
100 |
0.491 |
| radA | Streptococcus pneumoniae Rx1 |
48.14 |
100 |
0.491 |
| radA | Streptococcus pneumoniae D39 |
48.14 |
100 |
0.491 |
| radA | Streptococcus pneumoniae TIGR4 |
48.14 |
100 |
0.491 |
| radA | Streptococcus mitis NCTC 12261 |
48.132 |
100 |
0.489 |
| radA | Bacillus subtilis subsp. subtilis str. 168 |
47.788 |
100 |
0.482 |
| radA | Streptococcus mitis SK321 |
50 |
94.643 |
0.473 |