Detailed information NTG0366360

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: M594_RS09945
• Genome accession: NZ_CP047883
• Coordinates: 2069765..2070862 (+)
• Length: 365 a.a.
• NCBI ID: WP_173876716.1
• Uniprot ID: -
• Organism: Streptococcus mitis strain S022-V3-A4
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2064765..2075862

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M594_RS09920 (M594_09965)	pgsA	2065280..2065825 (-)	546	WP_020900979.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
M594_RS09925 (M594_09970)	rodZ	2065836..2066663 (-)	828	WP_173876712.1	cytoskeleton protein RodZ	-
M594_RS09930 (M594_09975)	yfmH	2066705..2067988 (-)	1284	WP_173876713.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
M594_RS09935 (M594_09980)	yfmF	2067985..2069235 (-)	1251	WP_173876714.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
M594_RS09940 (M594_09985)	yaaA	2069394..2069762 (+)	369	WP_173876715.1	S4 domain-containing protein YaaA	-
M594_RS09945 (M594_09990)	recF	2069765..2070862 (+)	1098	WP_173876716.1	DNA replication/repair protein RecF	Machinery gene
M594_RS09950 (M594_09995)	guaB	2070912..2072390 (-)	1479	WP_173876717.1	IMP dehydrogenase	-
M594_RS09955 (M594_10000)	trpS	2072542..2073567 (-)	1026	WP_173876718.1	tryptophan--tRNA ligase	-
M594_RS09960 (M594_10005)	-	2073773..2075395 (+)	1623	WP_173876719.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 42030.29 Da
• Isoelectric Point: 9.1073

>NTDB_id=366360 M594_RS09945 WP_173876716.1 2069765..2070862(+) (recF) [Streptococcus mitis strain S022-V3-A4]
MWLQHLSLKTFRNYKETKIDFNPKLNIFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDKEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSVRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSAQKIDETFLSVLDDQLVDYGCCVMNHRLDFIKKLEHFGRKKHFELSNQIEELSIAYQSSVKPTEKEDLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISHSIQTFITTTSLDHLQNLPENLSIFTIQDGKVAVNRN

Nucleotide

• Length: 1098 bp

>NTDB_id=366360 M594_RS09945 WP_173876716.1 2069765..2070862(+) (recF) [Streptococcus mitis strain S022-V3-A4]
ATGTGGCTACAACACCTATCTCTCAAAACTTTTCGTAACTACAAAGAGACGAAAATAGACTTTAATCCTAAATTAAATAT
CTTTTTAGGACGCAATGCACAAGGTAAAACAAATATGTTAGAGGCTATCTATTTTTTAGCCTTAACACGCAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATAAGGAACAGCTTCATCTTTCAGGTCTTGTTCAGAAAAAAACTGGATCC
ATTCCTCTCGAAATCGAACTAACACAAAAAGGCCGTGTGACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTCGGACACATGAATGTTGTCCTATTTGCTCCTGAAGATCTACAACTAATTAAAGGAGCACCTTCAGTTCGACGAAAAT
TCATTGATATGGAGCTTGGGCAAATTAAGCCAATCTATTTATCAGATTTAACCAATTATAACCATATTCTTAAGCAAAGA
AATACCTATCTAAAATCAGCTCAAAAAATAGATGAAACCTTCCTTTCAGTACTAGATGATCAGCTAGTCGATTATGGATG
TTGTGTAATGAATCACCGCTTAGATTTTATAAAAAAACTAGAGCATTTTGGCCGTAAGAAACATTTTGAACTCTCTAATC
AGATTGAAGAGTTGTCAATAGCCTATCAATCTTCTGTAAAGCCAACTGAAAAAGAAGACTTATCAGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGGTCCAGAGATTTATTTAAAAAGAACACCGGTGTTGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGTCAAGGCCAACATCGTAGTCTCGTCCTTTCTATAAAATTAGCAGAAATCG
AATTAATGGAAAGTATTACTACAGAATCTCCGATATTATTACTTGACGATGTCATGAGTGAACTCGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCATTCAATCCAAACCTTTATTACAACAACAAGCTTAGATCATCTTCAAAATCTACC
AGAAAATCTAAGTATTTTCACTATTCAGGATGGTAAAGTTGCTGTAAATAGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	95.89	100	0.959
recF	Bacillus subtilis subsp. subtilis str. 168	45.799	100	0.463